Alteriqipengyuania flavescens: QQW98_04050
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Entry
QQW98_04050 CDS
T09518
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
aflv
Alteriqipengyuania flavescens
Pathway
aflv02020
Two-component system
aflv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aflv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QQW98_04050 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QQW98_04050 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aflv03021
]
QQW98_04050 (rpoN)
Transcription machinery [BR:
aflv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QQW98_04050 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Sigma70_r4
Arg_repressor
HTH_3
Motif
Other DBs
NCBI-ProteinID:
WJY19411
LinkDB
All DBs
Position
773010..774449
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AA seq
479 aa
AA seq
DB search
MALGPRLDLRQSQSLVMTPQLQQAIKLLALSNLEIETFISDALESNPLLEAGEVRREDGV
DDVPPAEETAADNSMEGDSALDIDPDSLDRDRDTGDFGAASASYGEEGPDIAEQGDGGPT
LAEHLHAQVGAASPDARTAFIAVHMIGLLDEAGYLATPLRHIAGELGAQEQEVEAALEVL
QSLDPTGVGARSLAECLALQAKEADRFDPCMEALLENLDLIARGDIARLKRFCGVDDEDF
ADMIAEIRGYDPKPGLKFGDNTAGAVVPDVLISAQDAGQGTNWRIRLNAATLPRLVVNRD
YYLDLKNGASDKKSRAWLGEKLADANWLIKALDQRQKTILKVSEAIVKLQEGFFRKGVSQ
LRPLTLREVAEAIDMHESTVSRVTSNKYLHCDRGTFELKYFFSSGVSSSDGEGASAEAVK
ARIQALTDAEDPKKILSDDKLVELLKAEGFDIARRTVAKYREAAGIGSSVQRRRAKKLG
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggcactgggcccacggctcgacctgcgccagtcgcaatcgctggtgatgacgccgcag
ctgcagcaggcgatcaagctgctggcgctgtcgaacctcgagatcgagactttcatttcc
gacgcgctggaaagcaatccgctgctcgaagcaggcgaggtccggcgtgaagatggggtc
gacgacgtgcccccggcagaggaaaccgccgccgacaattcgatggagggcgacagcgcg
ctcgacatcgatcccgacagtctcgaccgggaccgcgatacgggcgacttcggcgcagcg
agcgcatcctatggcgaggaaggccccgacatcgccgaacagggcgacggcgggccgacg
ctggccgaacacttgcacgcgcaagtgggcgcggcatcgcccgatgcgcgcaccgccttc
atcgccgtgcacatgatcgggctgctcgacgaagcgggctatcttgccaccccgctgcgg
cacatcgccggcgaactgggcgcgcaggagcaagaggtggaagcggcgctggaggtgctg
caatcgctcgatcccacgggtgtcggcgcgcgcagcctagccgaatgcctcgccctgcaa
gcgaaggaggccgatcgcttcgacccgtgcatggaggcgctgctcgaaaacctcgacctg
atcgcccggggcgatatcgccaggctaaagcggttctgcggcgtcgacgacgaggatttc
gccgacatgatcgccgaaatccgcggatacgacccgaagccgggcctgaagttcggcgac
aacaccgcaggcgcggtggtgcccgacgtgttgatttccgcgcaggatgccggccaaggt
actaattggcgtattcgcctgaacgccgcgacgctcccccggctggtggtcaaccgggac
tattacctcgacctgaaaaacggcgcgagcgacaagaaaagccgcgcctggctgggcgag
aagctggccgacgcaaactggctcatcaaggcgctcgaccagcggcagaagaccatcctg
aaagtgagcgaggcgatcgtgaagctgcaggaaggcttttttcgcaaaggcgtgtcccag
ctgcgccccctcaccttgcgcgaagtggccgaggcgatcgacatgcacgaaagcacggtc
agccgcgtgaccagcaacaagtacctgcattgcgaccgcggcacgttcgaactgaagtat
tttttcagcagcggcgtctccagctcggatggcgaaggcgccagtgcggaagcggtgaag
gcgcgcatccaggcactgaccgatgcggaagatccgaagaagatcctgtcggacgacaag
ctggtcgagcttttaaaggccgaaggcttcgacatcgcccgtcgcacggtggccaagtat
cgcgaggcggccggcatcggcagcagcgtgcaacgccggcgcgccaagaagctgggttaa
DBGET
integrated database retrieval system
