KEGG   Pseudoblastomonas flavescens: QQW98_04485
Entry
QQW98_04485       CDS       T09518                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
aflv  Pseudoblastomonas flavescens
Brite
KEGG Orthology (KO) [BR:aflv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aflv03400]
    QQW98_04485
Enzymes [BR:aflv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QQW98_04485
    5.6.2.6  RNA 3'-5' helicase
     QQW98_04485
DNA repair and recombination proteins [BR:aflv03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    QQW98_04485
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: WJY19489
LinkDB
Position
complement(848938..851412)
AA seq 824 aa
MGSSNTDPTPPEIAQWFAGRGWRVRRHQSAMLAASDAGRHALLVADTGAGKTLAGFLPTL
SDFTPSRLGDAEPPAGLHTLYVSPLKALAHDVQRNLIAPIEEMGLPIRVETRSGDTPSDR
KRRQREKPPHVLLTTPESLSLLLSYPDSFELFAGLKRIVIDEIHAFATGKRGDLLALSLA
RLQAIAPGLRRAALSATVANAEGFREWLAPWGDLDTVELVEGEEGAPAEVEILLPEEERV
PWGGHAATWAIPQLYDLIRQNRTTLVFTNTRFLAEYIFQHLWDANGENLPIGIHHGSLSK
EARRKVEGAMARGELRALVATASLDLGVDWGDIDLVVQMGAPKGSSRLLQRIGRANHRLD
QPSRALLVPGNRFEFLEATAAKEAVDEGRRDGEDFRPGGLDVLAQHVMACACAAPFEEAA
LLAEVRSSLAYAWVDEAVWQRVLGFVATGGYALKAYDRFQRITRDRAGMWRLTHPEMAAK
HRLNAGIIIDSEMLEVRFRNGRSLGRVEERFAAQLSPGDTFFFSGTSLEVEQIRDMEVIV
RASKESAMIPSYGGARMPLTTHLADRVQAMLDDRAGWGRFPDDVREWLEVQDWRSEMPAP
GRLLVESFPHAKRHYSVYYTFAGWNANQSLGMLVTKRMEDRGLKPLGFNANDYCLAVWGL
RPVTEHAPLLSPDILADEFVDWVQQSHLLRRAFREVAVIGGLVERQHPGKRKTGKQVTFS
TDLIYDVLRKYEPDHVLLEAAWADARTLMTDVGRLGDVLDHAAERLVHVELDRVSPLAVP
IMVMIGRESTPQGSADDELLLEAESLAASAMRPERPERPEVDKN
NT seq 2475 nt   +upstreamnt  +downstreamnt
gtgggtagctccaacaccgatcctacaccgccggagatcgcgcagtggttcgcagggcgc
gggtggcgggtgcggcggcaccagagcgccatgctggcggcgagcgatgcggggcgccat
gcgctgctggtggcggatacgggcgcgggtaagacgctggcgggcttcctgccgacgctc
tccgacttcacgccttcgcgccttggcgacgccgagccgccggcagggctgcacacgctc
tatgtcagtccgctcaaggccctcgcgcatgacgtgcagcgcaacctcatcgcaccgatc
gaggaaatgggcctgccgatcagggtcgagacgcgcagcggcgacacgccgtcggatcgc
aagcgccggcagcgggagaagccgccgcacgtcctgctgaccacgcccgagtcgctctcc
ctgctgctcagctatcccgacagtttcgagctgttcgcaggcctcaagcggatcgtgatc
gacgagatccacgccttcgccaccggcaagcgcggggacttgctcgcgctctcgctggcg
cggttgcaggccattgcgcccggcctccggcgcgcagccctgtcggcgacagtggctaat
gcggaagggtttcgcgagtggctcgccccgtggggtgacctcgatacggtcgaactcgtg
gaaggcgaggagggcgcgcccgccgaggtggagatcctgctgccggaagaggagcgcgtg
ccgtggggcggccatgcggcgacctgggccatcccgcagctctacgacctcatccgccag
aaccgcaccacgctggtcttcaccaacacgcgcttcctggcggagtacatcttccagcac
ctgtgggacgcgaacggggagaacctgcccatcggcatccaccacggcagcctgtctaag
gaggcgcgccgcaaggtggaaggggcgatggcgcgcggcgagctgcgcgcgctggtggcg
acggccagcctcgatctcggcgtcgactggggcgacatcgacctcgtcgtgcagatgggc
gcgcccaagggctccagccgcctgctgcaacgcatcggccgcgccaaccaccgcctcgac
cagccgagccgcgcgctgctcgtgcccggcaaccggttcgagttcctcgaagcgaccgcg
gccaaggaggcggtcgacgagggccggcgcgacggcgaggacttccgccccggcgggctc
gacgtgctcgcccagcacgtgatggcctgcgcctgcgcggccccgttcgaagaggctgcg
ctgctggccgaagtccgctccagcctcgcctatgcgtgggtggacgaggcggtgtggcag
cgcgtgctcggcttcgtggccaccggcggctatgcgcttaaggcctacgaccggttccag
cgcatcacgcgtgacagggccggcatgtggcgtctgacccatccggaaatggcagcgaag
catcggctcaatgccgggatcatcatcgattccgagatgctggaggtgcgcttccgcaac
gggcggtcgctcggccgggtggaggaacgcttcgcggcgcagctatcgccgggcgacacg
ttcttcttttccggcacgagcctggaagtcgaacagatccgcgacatggaggtgatcgtc
cgtgcgtcgaaggaatctgcgatgatcccctcctatggcggcgcgcgcatgccgctgacc
acgcatttggcagaccgggtgcaggcgatgctggacgaccgggccggctggggccgcttc
ccggacgacgtgcgcgaatggctcgaggtgcaggactggcgcagcgaaatgcccgcgccg
ggccggctgctggtggaaagcttcccccatgcgaagcggcactacagcgtctattacacc
ttcgccggttggaacgcgaaccagtcgctcggcatgctggtgaccaagcggatggaggat
cgcgggctcaagccgctgggtttcaacgccaacgattattgccttgccgtgtggggcctt
cgcccggtgaccgaacacgcgccgctgctgtcgcccgacatcctggccgacgagttcgtc
gactgggtccagcagtcgcatttgctgcgccgcgcctttcgggaggttgcggtgataggg
ggcctcgtggagcgccagcacccgggcaagcgcaagaccggcaagcaggtcacgttttcg
accgacctgatctacgacgtgctgcggaagtacgagccggaccacgtcctgctggaagcc
gcctgggccgatgcccgcacgctgatgaccgacgtcgggcggctgggcgacgtgctcgat
catgcggcggagcgactggtccatgtcgaactcgaccgggtcagcccgctcgcggtgccg
atcatggtaatgatcggacgggaaagcaccccgcagggctctgccgacgacgaattgcta
ctggaggcggaaagcctcgccgcctcagccatgcggccggagcggccggagcgaccggag
gttgacaagaactag

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