Pseudoblastomonas flavescens: QQW98_05080
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Entry
QQW98_05080 CDS
T09518
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aflv
Pseudoblastomonas flavescens
Pathway
aflv03030
DNA replication
aflv03430
Mismatch repair
aflv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QQW98_05080 (dnaQ)
03430 Mismatch repair
QQW98_05080 (dnaQ)
03440 Homologous recombination
QQW98_05080 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aflv03032
]
QQW98_05080 (dnaQ)
03400 DNA repair and recombination proteins [BR:
aflv03400
]
QQW98_05080 (dnaQ)
Enzymes [BR:
aflv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QQW98_05080 (dnaQ)
DNA replication proteins [BR:
aflv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QQW98_05080 (dnaQ)
DNA repair and recombination proteins [BR:
aflv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QQW98_05080 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WJY19598
LinkDB
All DBs
Position
968945..969634
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AA seq
229 aa
AA seq
DB search
MREIIFDTETTGLDPKTGDRMVEIGCIEMVNRVATGNSYHAYFNPERTMPVEAEAVHGLG
DAFLADKPLFAAKARELLDFIGDSPLVAHNAGFDFGFLNNELRLCNTEEVSLNRMVDTVA
LARKKHPGAKLSLDALCTRYGIDRSHRTKHGALLDAELLAQVYVELTGGRQIGLELAAEE
SGAATPERHVYTPRADREVRPARPHFASAEELARHAEFIGRMDKPAWQS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaaatcatcttcgataccgaaacgaccggcctcgaccccaagacgggcgaccgc
atggtcgagatcggatgtatcgagatggtcaaccgggttgcgaccggtaattcctaccac
gcctatttcaatcccgagcggaccatgccggtcgaggccgaggcggtgcacgggctcggc
gatgccttcctggccgataagccgctgttcgccgcaaaggcgcgcgaattgctcgatttc
atcggcgattccccgcttgtcgcgcacaacgccgggttcgatttcggcttcctcaacaac
gaactgcgcctctgcaataccgaggaagtctcgctcaaccggatggtcgatacggtggcg
ctcgcgcgcaagaagcaccccggcgcgaaactctcgctcgatgcgctgtgcacccgctac
gggatcgaccgcagccaccggacgaagcacggcgcgctgctcgatgccgaactgctggcg
caggtctatgtcgagctgaccggcggtcggcagatcgggctggagcttgccgcggaagag
agcggcgctgccacccccgagcgccacgtttacaccccgcgcgcggaccgcgaggtgcgc
cctgcccgcccccatttcgccagcgccgaggaacttgcccgccatgcggagtttatcggc
aggatggacaagcccgcctggcaaagctga
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