Alteriqipengyuania flavescens: QQW98_05940
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Entry
QQW98_05940 CDS
T09518
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aflv
Alteriqipengyuania flavescens
Brite
KEGG Orthology (KO) [BR:
aflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aflv03016
]
QQW98_05940
Enzymes [BR:
aflv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
QQW98_05940
Transfer RNA biogenesis [BR:
aflv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
QQW98_05940
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WJY19756
LinkDB
All DBs
Position
complement(1133374..1133991)
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AA seq
205 aa
AA seq
DB search
MAVYFHEEDLPEGVLAPGPIAVDTETMGLVTPRDRLCVVQISDGQGDEHLVRFNPGSDYD
APNLTAVLADPERLKLYHFARFDLAAIEYYLGVMAAPVFCTKIASKLVRTYTDRHGLKVL
VEELVGENISKQQQSSDWGGKELSEAQRDYAASDVRYLHRMREKLVERLEREGRTELAQA
CFDFLPTRARLDIAGWADHDIFSHM
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatatttccacgaagaagacctgcccgaaggcgtgctcgcgccgggcccgatt
gccgtcgatacggagacgatgggcctcgtcacgccgcgcgaccggctctgcgtcgtccag
atcagcgacgggcagggggacgagcatctcgtccgcttcaaccccggcagcgattacgac
gcgccgaacctcaccgccgtgctcgccgatccggagcggctgaagctgtaccacttcgcc
cgcttcgaccttgccgccatcgaatattatctcggcgtgatggccgcgccggtgttctgc
accaagatcgccagcaagctggtgcgcacctacaccgatcgccacgggctgaaagtgctg
gtggaagagctggtgggcgagaatatctccaagcagcagcagtcgagcgactggggcggc
aaggagctgtccgaagcccagcgcgactatgcggcgtcggacgtacgctatctccaccgc
atgcgcgaaaagctggtcgagcggttggaacgcgaagggcggacggaactcgcgcaggcc
tgtttcgatttccttcccacgcgggcgcggctggatatcgccggctgggccgaccacgac
atcttcagccacatgtaa
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