Alteriqipengyuania flavescens: QQW98_09950
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Entry
QQW98_09950 CDS
T09518
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aflv
Alteriqipengyuania flavescens
Pathway
aflv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aflv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QQW98_09950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aflv03021
]
QQW98_09950
03400 DNA repair and recombination proteins [BR:
aflv03400
]
QQW98_09950
Enzymes [BR:
aflv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QQW98_09950
Transcription machinery [BR:
aflv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QQW98_09950
DNA repair and recombination proteins [BR:
aflv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QQW98_09950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF211
Phage_tube_2
IDH
Motif
Other DBs
NCBI-ProteinID:
WJY17948
LinkDB
All DBs
Position
1909130..1910185
Genome browser
AA seq
351 aa
AA seq
DB search
MSVNTKNWQELKKPNTLEVKEGSDKRRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
ITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGEGPKRLQLSATGPATVKAGDI
AVSGDIEVLNKDLVLCHLDEGATLNMELTADTGKGYVPAVQNRPADAPIGLIPVDSLYSP
IRQVSYKVDNARVGQELDYDKLNLTIETDGTVTPEDAIAYAARILQDQLTLFVHFEDGIP
QPQSAMIGVAAEPQQDDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAE
MLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaatacgaagaactggcaggaactgaaaaagccgaacacgctcgaagtgaag
gaaggcagcgacaagaggcgcaaggccaccttcgttgccgagccgctcgagcgtggcttc
ggcctcacgctcggcaatgcgctgcgccgcgtgctgctctccagcctgcagggcgccgcg
atcacctcgatcaagatcgaaaacgtgctgcacgaattcagcagtctggccggcgtgcgc
gaagatgtcaccgacatcgtcctcaacgtgaagcagatcgcgctgaagatggaaggtgaa
ggccccaagcgcctgcagctgtccgccaccggccccgccaccgtcaaggccggcgacatc
gccgtgtcgggcgacatcgaagtcctcaacaaggatctcgtgctctgccacctcgacgaa
ggcgcgacgctgaacatggaactgaccgcggacacgggtaagggttatgttcccgccgtg
cagaaccgtccggccgacgcgccgatcggcctgatcccggtcgacagcctgtattcgccg
atccgccaggtcagctacaaggtcgacaatgcccgcgtcgggcaggaactcgactatgac
aagctgaacctgacgatcgagaccgacggcaccgtcaccccggaagatgcgatcgcctat
gccgcgcgcatcctgcaggaccagctgacgctgttcgtccacttcgaagacggtatcccg
cagccgcagagcgccatgatcggcgtggccgcggaaccgcagcaggacgatgccaaccag
ctcaaccgctacctcctcaagaaggtggacgagctggaactgtcggtccgcagcgccaac
tgcctgaagaacgacaacatcatctacatcggcgacctggtccagaagaccgaagccgag
atgctgcggacgccgaacttcggccgcaagtccctgaacgagatcaaggaagtgctttcc
agcatgggcctgcgtctcggcatggacatccccggctggccgccggaaaacatcgaggaa
atggccaagaagctcgaacaggagctgctgggctaa
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