Alteriqipengyuania flavescens: QQW98_12120
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Entry
QQW98_12120 CDS
T09518
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
aflv
Alteriqipengyuania flavescens
Pathway
aflv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aflv00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QQW98_12120 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aflv03021
]
QQW98_12120 (rpoD)
Transcription machinery [BR:
aflv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QQW98_12120 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Disulph_isomer
DUF4168
Motif
Other DBs
NCBI-ProteinID:
WJY18354
LinkDB
All DBs
Position
2370424..2372433
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AA seq
669 aa
AA seq
DB search
MASDARTKQTEDAPLIDLNEASIKKLITKAKKKGHVTYDELNEALPQDQMSSEQIEDVMS
ALNDMGVNVVESDEEAEAAKEAASEVEEIQDGEKKNVPEAKKKETVERTDDPVRMYLREM
GAVELLSREGEIAIAKRIEAGRDTMIIGLCQSPITFHAIIHWSEALNAEEMQLREILDLD
AMLSKEPPADKLNDDAEDDKDDGEISEETAGPTIRDDDDDDSDDEDDGADEDGEGSSKKK
DDDEEEDNTMSLAQMEAALKPDAIERFARITSLFKKFEKLQKERVETLGRGEQLPAAKER
KYESLGEELTAEVESMQFHATKIEFLVDNLYAFNRRLTALGGQMLRLAERHKIKRMDFLD
AYVGNELDDSWIAEKAKKDKKWAAFAEREADAVDRIRTEIADIASQTGMALPEFRRIVNM
VQKGEREARIAKREMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRG
YKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQFLHDQGREPTPEEMA
EKLSMPLEKVRKVMKIAKEPISLETPIGDEEDSHLGDFIEDKNAIIPVDAAIQANLKETV
TRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRS
RKMRSFLDQ
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgacgcgagaaccaagcagaccgaagacgcaccgctgatcgacctcaacgaa
gcgtcgatcaagaagctgatcaccaaggcgaagaagaaggggcacgtcacctatgacgag
ctcaacgaagccttgccgcaggaccagatgtcttcggagcagatcgaggacgtaatgagc
gcgctcaacgacatgggcgtgaacgtggtcgaaagcgacgaggaagcggaagccgccaag
gaagccgcgtccgaggtcgaggaaatccaggacggggaaaagaagaacgtccccgaggcc
aagaagaaggaaacggtggagcggacggacgatccggtccgcatgtacctgcgcgaaatg
ggcgcggtcgagctgctcagccgcgagggcgaaatcgccatcgccaagcggatcgaggcc
gggcgcgacacgatgatcatcggcctgtgccagagcccgatcaccttccacgccatcatc
cactggtccgaagccctgaatgccgaggaaatgcagctgcgcgagatcctcgatctcgac
gcgatgctgtccaaggaaccgccagccgacaagctcaacgacgacgccgaagacgataag
gacgacggcgaaatctcggaagagaccgccggtccgaccatccgtgacgacgatgacgac
gacagcgacgacgaggacgacggcgccgacgaggacggcgaaggttcgtccaagaagaag
gacgacgacgaggaagaggacaacaccatgtccctcgcccagatggaagcggcgttgaag
cccgatgccatcgaacggttcgcgcgcattacctcgctgttcaagaagttcgagaagctg
cagaaggaacgcgtcgagacgctcggccgcggcgaacagctgccggcggcgaaggaacgc
aagtacgaaagcctgggcgaggaactgaccgccgaggtggaaagcatgcagttccacgcg
accaagatcgaattcctggtcgacaacctctatgccttcaaccgccgcctgaccgcgctg
ggcggccagatgctgcgcctcgccgaacggcacaaaatcaagcggatggactttctcgac
gcctatgtcggcaacgagctcgacgacagctggattgccgagaaggcgaagaaggacaag
aaatgggcggcctttgcggagcgcgaggccgatgccgtcgatcgcatccgcaccgaaatc
gccgatatcgccagccagaccggcatggcgctgccggaattccgccgtatcgtgaacatg
gtacagaaaggcgagcgcgaggcccgcatcgccaagcgcgagatggtggaggcgaacctg
cgcctggtgatctcgatcgccaagaaatacaccaaccgcgggctgcaattcctcgacctg
atccaggaagggaacatcggcctgatgaaggcggtcgacaagttcgaataccgccgcggc
tacaagttcagcacctatgccacgtggtggatccggcaggcgattacccgctcgatcgcc
gaccaggcgcgcacgatccgcatcccggtccacatgatcgagacgatcaacaagctggtc
cgcacgagccgccagttcctccacgaccaaggccgcgaaccgacgccggaagagatggcc
gagaagctgtcgatgccgctcgagaaggttcgcaaggtgatgaaaatcgccaaggagccg
atcagcctcgaaacgcccatcggcgacgaggaggacagccacctcggcgatttcatcgag
gacaagaacgccatcatcccggtggatgccgcgatccaggcgaacctcaaggaaaccgtc
acccgcgtgcttgccagcctcaccccgcgcgaggagcgcgttttgcgcatgcgcttcggc
atcggcatgaataccgaccacacgctggaagaggtcggccagcagttcagcgtgacccgc
gaacgtatccgccagatcgaggccaaggcgctgcgcaagctgaagcaccccagccgcagc
cgcaaaatgcgcagtttcctcgaccagtaa
DBGET
integrated database retrieval system
