Alteriqipengyuania flavescens: QQW98_12850
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Entry
QQW98_12850 CDS
T09518
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aflv
Alteriqipengyuania flavescens
Pathway
aflv03030
DNA replication
aflv03430
Mismatch repair
aflv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aflv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QQW98_12850 (dnaE)
03430 Mismatch repair
QQW98_12850 (dnaE)
03440 Homologous recombination
QQW98_12850 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aflv03032
]
QQW98_12850 (dnaE)
03400 DNA repair and recombination proteins [BR:
aflv03400
]
QQW98_12850 (dnaE)
Enzymes [BR:
aflv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QQW98_12850 (dnaE)
DNA replication proteins [BR:
aflv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QQW98_12850 (dnaE)
DNA repair and recombination proteins [BR:
aflv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QQW98_12850 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
COE1_HLH
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
WJY18488
LinkDB
All DBs
Position
complement(2513133..2516606)
Genome browser
AA seq
1157 aa
AA seq
DB search
MAFAPFVPLRVLSSYSMLEGAIEPKAIAKLAKERSFPAIAICDRNGLYGSVAFAAACFDE
GIQPIVGTLLGVAREQGGAGVDYLPLYAQDEAGWDNLCHLVSRAHLDRPLELEPHVRLDD
LEGQTDGLIALTGASEGGLTRLLADGQADHAEALLSRLESLFPQRLYIELARRGNAVEIA
AEEALIDLAYARDLPLVATNPANFADPHFYAAHDAMLCIANSTHIEAEDRPRSAKDSFVK
SERMMEEAFADIPEALANTLVVAQRCAVAPPKRPPILPSLAGDLEGEAKMLAEDARKGLE
ARLEPYGEMSVEERKAYFDRLDFEVEIIVGMGFPGYFLIVADFIKWAKDNGIPVGPGRGS
GAGSLVAWALTITDLDPLKLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQAKYGA
DHVAQIITFGKMKARAVLRDCGRILQMSYGHVDRLCKMVPNHPTDPWTLPRALNGAAEFK
REYSNDNEVKRLVDLALQLEGLPRNSSTHAAGVVIGDRPLARLVPLYRDPRSDMPVTQFD
MKYVESSGLVKFDFLGLKTLSVLQKAVDLLARRGVEIDLGALAWDDPGVFDLLKRGDTVG
VFQLESEGMRRTLTAVKPTKFEDIIALVSLYRPGPMDNIPLFGKRKAGEVPIEYPHPKLE
GILAETYGIFVYQEQVMQAAQILAGYSLGDADLLRRAMGKKVQAEMDAQRTRFCDGCLEV
SGIDRKQANELFDLIDKFAGYGFNKSHAAAYALLAYQTAWLKAHYPEEFYAASMCFDMHQ
WEKLAVFVDDMRRNGIDLLPPDINESEAEYVVQPTDDGYAVRYGLGGLRNVGEKAMAAIV
SEREGSGKFTSLEEMFGRLPQGCMNRRQLEALASAGAFDTLEPNRALVHDNAELLMAVVD
AAERERSSGQAALFGGEDDAGSNLRLKETAEWSRPDMMAKERETFGFYFSAHPVQAYREV
ASANGARTYAGLMGGGTESAGRSRAVMAALVEGVNIGKTRKGKDFIRADFSDTTGQFSAA
CFDEELVEPFRKWAASGECVLLTVELDQPSPDEPPRVTVRGARPLGEVTSAARMLLRLDV
ADEAGLAQLATSVSQDAQATGEIVVRLATSEGSFVTMRLGRNFRVDGELAERLGEIPGLA
NVSIAARSGSDRLRLVA
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgctcccttcgtccctttacgcgtcctttccagctattcgatgctggagggg
gcaatcgagcccaaggccattgccaagctggcgaaggagcgcagtttccccgcaatcgct
atctgcgaccgcaacgggctttacggctcggtcgccttcgctgccgcctgcttcgacgag
gggatccagcccatcgtcggtacgctgctgggcgtggcgcgggaacagggcggggccggc
gtcgattacctgccgctctatgcgcaggacgaggcggggtgggacaacttgtgccatctc
gtcagccgcgcgcatctggaccggccgctggagctggaaccgcacgtccggctggacgat
ctggaaggccagaccgatggtctgatcgcgctcaccggcgcgagcgagggcgggctgacg
cggctgttggcagacgggcaggccgatcatgcagaggcgctgctctcgcgcctcgaaagc
ctgtttccgcagcgtctctatatcgagctcgcgcggcgcgggaatgcggtggagattgcc
gccgaggaagcgctgatcgatctcgcctatgcccgcgacctgccgctcgtcgccaccaat
cccgccaacttcgccgatccgcatttctacgcggcacacgacgcgatgctgtgcatcgcc
aattcgacccatatcgaggcggaagaccggccgcgcagcgcgaaggacagcttcgtgaag
tccgagcggatgatggaagaggctttcgccgacattccagaagcgctcgccaacacgctg
gtcgtggcgcagcggtgcgccgtcgccccgcccaagcgcccgcccatcttgccgagcctt
gccggcgacctcgaaggcgaggcgaagatgctggcggaggatgcgcgcaagggcctcgaa
gcgcggctcgaaccctatggcgaaatgtccgtcgaagagcgcaaggcctatttcgaccgg
ctcgatttcgaagtcgagattatcgtcgggatgggctttcccggctacttcctgattgtt
gcggacttcatcaagtgggccaaggacaatggcattcccgtgggcccggggcgcgggtcg
ggcgcaggcagcctggtcgcctgggcgctgaccatcacggacctcgacccgctgaaactg
ggcctgctgttcgaacgcttcctcaacccggaacgcgtgtcgatgcccgacttcgacatc
gacttctgcgaaacgcgccgcggcgaggtgatccgctacgtgcaggcgaaatacggcgcc
gatcacgttgcgcagatcatcactttcggcaagatgaaggcccgcgccgtgctgcgcgat
tgcgggcgtatcctgcagatgagctacggtcatgtcgaccggctctgcaagatggtgccg
aaccacccgaccgacccgtggacgttgccgcgtgcactgaacggcgcggcggaattcaag
cgcgaatacagcaacgacaacgaggtgaagcgcctcgtcgacctggcgttgcagctggaa
gggctacctcgcaacagctcgacccacgcggcgggcgtggtgatcggcgaccgcccgctg
gccaggctcgtgcctctttaccgcgatccgcgctctgacatgccagtgacccagttcgac
atgaaatatgtcgaatcgagcggactggtgaaattcgacttcctcgggctgaagacactg
tcggtgctccagaaggcagtcgacctcctcgcccggcgcggggtcgaaatcgacctcggc
gcgctggcgtgggacgatccgggcgtcttcgacctgctcaagcgcggcgacacggtcggc
gttttccagctggaatcggaaggcatgcgccgcacgctgaccgcggtgaagccgaccaag
ttcgaggatatcatcgccctcgtctcgctctaccgccccggcccgatggacaacatcccg
ctgttcggcaagcgcaaggcgggcgaggtgccgatcgagtacccgcatcccaagctggaa
ggcatcctggcggaaacatacggcattttcgtctatcaggaacaggtgatgcaggccgcg
cagatcctcgccggctactcgctcggcgatgccgacctgctgcgccgtgcgatgggcaag
aaggttcaggcggaaatggatgcgcagcgcacccgcttctgcgacgggtgcctggaagtg
tccggcatcgacaggaaacaggcgaacgagctgttcgacttgatcgacaagttcgccggc
tacggcttcaacaagtcgcacgcggccgcctacgcgctgctcgcctaccagaccgcgtgg
ctgaaggcgcattacccggaagaattctacgccgcgtccatgtgcttcgacatgcaccag
tgggaaaagctggcggtcttcgtcgacgacatgcgccgcaacggcatcgacctgttgccg
cccgatatcaacgagagcgaggctgagtacgtggtccagccgaccgatgacgggtatgca
gtgcgctatggcctcggcggcctgcgcaatgtcggcgaaaaggcgatggcggccatagtt
tcggaacgggaggggagcggcaagttcacctccctggaggaaatgttcggccgcctgccg
cagggctgcatgaaccgccgccagctggaagcgctcgcctctgccggggcgttcgacacg
ctggagcccaatcgcgcgctcgtccacgacaatgcggagctgttgatggcggtcgtcgat
gctgcggagcgggagcggtcaagtgggcaggcggccctgttcggcggggaggacgatgcc
ggttccaacctgcgcctcaaggaaaccgccgaatggtcgcggcccgacatgatggcgaaa
gagcgcgagactttcggtttctatttctccgcccatccggtgcaggcctatcgagaggtg
gccagcgccaatggtgcgcgcacctatgccgggctgatgggcggcgggaccgaaagcgcc
gggcgcagccgcgcggtgatggccgcgctggtcgagggcgtgaacatcggcaagacgcgc
aagggcaaggacttcatccgcgccgatttctccgacacgaccggccagttcagcgcagcc
tgtttcgacgaggagctggtggaaccgtttcgcaagtgggcggccagcggcgaatgcgtt
ttgctgactgtcgagctcgaccagccgagccccgacgaacctccccgtgtcaccgtgcgc
ggcgcgcggccgcttggcgaagtgaccagcgcagcacggatgctgttgcggctcgacgtg
gccgacgaggcggggcttgctcagcttgccaccagcgtttcgcaggatgcgcaggcgacg
ggagagatcgtggtgcgcctcgccaccagtgaaggctctttcgtgacgatgcggctcggc
cgcaatttccgcgtcgatggcgaactggccgaacggctaggcgagatccccggtctcgcc
aacgtcagtatcgctgcccgcagcgggagcgaccggctgcgcctcgtcgcgtga
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