Pseudoblastomonas flavescens: QQW98_13360
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Entry
QQW98_13360 CDS
T09518
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
aflv
Pseudoblastomonas flavescens
Pathway
aflv00300
Lysine biosynthesis
aflv00470
D-Amino acid metabolism
aflv01100
Metabolic pathways
aflv01110
Biosynthesis of secondary metabolites
aflv01120
Microbial metabolism in diverse environments
aflv01230
Biosynthesis of amino acids
Module
aflv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
aflv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QQW98_13360 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QQW98_13360 (dapF)
Enzymes [BR:
aflv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QQW98_13360 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
WJY18581
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All DBs
Position
2621565..2622374
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AA seq
269 aa
AA seq
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MRVSFTKMHGLGNDFIVLDAREQALPQLTEKLVSSLADRRTGIGCDQLIVLEDTDEADVR
MRIFNSDGGEVEACGNAARAVSLREGKPARILTQGGIIDAVPADRGARIDMGSPRFEWTQ
IPLAYAMDTASMPVAWGELEAPVAVNVGNPHVIFFVDDLGAVELGRLGPIIENDPLFPER
VNVNVAQVMDRKSIRLVVWERGAGLTRACGTGACATAVAAAKRGLTERSVTVRLPGGPLD
IEWTGEDRIMMSGPAAESFRGTFKAVDYS
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtttccttcaccaagatgcacggcctcggcaacgatttcatcgtgctcgacgcg
cgcgaacaggcgctgccgcagctgaccgaaaagctggtcagttcgctggccgaccggcgc
accggcatcggttgcgaccagctgatcgtgctggaggatacggacgaggccgatgtccgc
atgcgcattttcaacagcgacggcggtgaagtggaagcctgcgggaacgcggcgcgcgcc
gtgtcccttcgcgaaggcaagcctgcgcgcatccttacccaaggcggcatcatcgacgcc
gtaccagccgatcgcggcgcacggatcgacatgggcagcccgcggttcgaatggacgcag
atcccgctcgcttatgcgatggacactgcctccatgcccgtcgcctggggcgaactcgag
gcgccggtcgccgtcaacgtcggcaacccgcacgtcatcttcttcgtggacgacctcggc
gcggtggagctcggcaggctcggccctattatcgagaacgacccgctttttcccgaacgg
gtgaacgtcaacgtggcgcaggtcatggatcggaagtcgatccgccttgtcgtgtgggaa
cgcggcgcggggctcacgcgcgcatgcggcacgggcgcctgtgcgacggcggtcgcagcg
gcgaagcgcggccttacggagcgcagcgtcacggtgcgcctgcccggcggcccgctcgac
atcgaatggacgggggaggaccggatcatgatgtccggcccggcggcggagagctttcgc
ggcactttcaaagcggtcgactattcatga
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