Aspergillus fumigatus: AFUA_1G11670
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Entry
AFUA_1G11670 CDS
T01017
Name
(RefSeq) small nuclear ribonucleoprotein Lsm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
afm
Aspergillus fumigatus
Pathway
afm03018
RNA degradation
afm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AFUA_1G11670
09123 Folding, sorting and degradation
03018 RNA degradation
AFUA_1G11670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afm03019
]
AFUA_1G11670
03041 Spliceosome [BR:
afm03041
]
AFUA_1G11670
Messenger RNA biogenesis [BR:
afm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AFUA_1G11670
mRNA degradation factors
5'-3' decay
Lsm complex
AFUA_1G11670
Spliceosome [BR:
afm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
AFUA_1G11670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Gemin6
Motif
Other DBs
NCBI-GeneID:
3510231
NCBI-ProteinID:
XP_752533
UniProt:
E9R2B2
LinkDB
All DBs
Position
1
Genome browser
AA seq
98 aa
AA seq
DB search
MSLHSYINKKVLILTVDGRTLLGTLLSTDQLTNLVLLDTIERIIRTPDDPEPSSQIEHGL
YLIRGDNVVLCGEVDEAIDNDIDWSKVKGEVVKGTKNA
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcattcctacatcaataaaaaagtcctcattctcactgtcgacggccgcact
ttactagggacactcttgtcgacggatcaattgacgaatcttgtcctgctggacacaatt
gaaaggatcatccgaaccccggatgaccccgagccgagctcgcagatcgaacacggactc
tacttgattcgaggcgacaatgtggttctgtgcggtgaagtcgatgaggcgatcgataac
gatatcgactggtcgaaggtgaaaggcgaggttgttaagggcacgaaaaacgcatga
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