Aspergillus fumigatus: AFUA_1G12000
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Entry
AFUA_1G12000 CDS
T01017
Name
(RefSeq) nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
afm
Aspergillus fumigatus
Brite
KEGG Orthology (KO) [BR:
afm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afm03019
]
AFUA_1G12000
03041 Spliceosome [BR:
afm03041
]
AFUA_1G12000
Messenger RNA biogenesis [BR:
afm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
AFUA_1G12000
Spliceosome [BR:
afm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
AFUA_1G12000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_PARP14_3
RRM_8
Motif
Other DBs
NCBI-GeneID:
3510646
NCBI-ProteinID:
XP_752566
UniProt:
Q4WSQ4
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All DBs
Position
1:complement(3168304..3171421)
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AA seq
489 aa
AA seq
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MAENMSTSGSSTLPPPPPQASSASGQQYDSSQGNGQANPSHMPPPPRPPVVIPQNTNPIP
TAITSPMSGNMMSPTSAGGYVRRAAPEPNKRALYVGGLDPRVTEDILKQIFETTGHVQSV
KIIPDKNDTITALLNLMTLVRLRGLCKPSTAVESISRYAEIRVNWAYQSNSANKEDTSSH
FHIFVGDLSNEVNDEILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAFRERADAEKALN
AMDGEWLGSRAIRCNWANQKGQPSISQQQAMAAMGMTPTTPFGHHHFPTHGVQSYDMVVQ
QTPQWQTTCYVGNLTPYTTQNDLVPLFHNFGYVLETRLQADRGFAFIKMDTHENAAMAIC
QLNGYNVNGRPLKCSWGKDRPPTGQFDNFSGQQPNSPFNSNPATYFPQYGGPGAPITPQG
TFHILSPSNSPHSCWARLGARGNDWPRIWPSPPECRLWPRTGYTQLWLEPAKQWQLWKWL
WGLPSVACL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaacatgtccacttctgggtcttccaccctcccacctccgcctccgcaagca
tcatctgcttctggtcagcagtatgattcttctcagggcaacggccaagccaatccttcc
catatgccacccccgcctcgtccgcctgttgtgattccacagaacaccaatcctattcca
accgctatcacgtccccgatgtccgggaacatgatgtccccgaccagtgctggtggatat
gtacgccgggccgcccccgagccaaacaagagagctctgtacgttggaggacttgatcca
agggtgaccgaggatatcctgaagcaaatcttcgagaccaccggtcatgtccagagtgtg
aagatcatccccgacaagaatgatacaattacggctttgttgaatttgatgaccctggtg
cggctgagagggctatgcaaaccctcaacggccgtcgaatccatcagtcggtatgcagaa
attcgggtgaactgggcttaccagtcaaattccgcgaacaaggaagatacttcttctcac
tttcacattttcgtcggcgatctaagcaacgaagtcaacgacgagatcctgctccaggcc
ttctccgccttcggctcggtgtcagaggctcgtgtcatgtgggatatgaagactggtcgt
tcccgtggctatggcttcgttgccttccgtgagcgtgccgatgcagagaaagcactgaat
gccatggacggcgaatggctcggttcgcgtgccattcgctgcaactgggctaaccagaag
ggacagccttctatttcccaacagcaggctatggcggccatgggcatgactcccaccacg
ccctttggccatcaccacttccctacgcatggggtccagagctacgacatggtcgttcag
cagacgccacagtggcagactacgtgctacgtgggtaatctgacaccgtacactacgcaa
aacgatcttgtccctctctttcacaatttcggatatgtacttgagacacgccttcaagca
gaccgtggattcgcctttatcaagatggatacacacgaaaatgctgcgatggctatttgc
caattgaatgggtacaacgttaacggacgtcctctgaaatgcagctggggtaaggaccga
cctcccaccggccaattcgacaatttctctggccagcaacccaattcacccttcaactcc
aatccagctacatactttcctcaatacggcggccctggtgctcctattaccccccagggt
acgtttcatattctttcccccagtaattcgccccactcctgctgggcgaggctgggagca
agggggaatgactggccaaggatatggccaagccccccagaatgcaggctttggccgcgg
acaggctacacccaactctggctggaaccagccaaacaatggcaactttggaaatggctt
tgggggctaccaagcgtagcttgtctctag
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