Aspergillus fumigatus: AFUA_1G13730
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Entry
AFUA_1G13730 CDS
T01017
Name
(RefSeq) 5'->3' exoribonculease Dhp1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
afm
Aspergillus fumigatus
Pathway
afm03008
Ribosome biogenesis in eukaryotes
afm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AFUA_1G13730
09123 Folding, sorting and degradation
03018 RNA degradation
AFUA_1G13730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afm03021
]
AFUA_1G13730
03019 Messenger RNA biogenesis [BR:
afm03019
]
AFUA_1G13730
03009 Ribosome biogenesis [BR:
afm03009
]
AFUA_1G13730
03016 Transfer RNA biogenesis [BR:
afm03016
]
AFUA_1G13730
Transcription machinery [BR:
afm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
AFUA_1G13730
Messenger RNA biogenesis [BR:
afm03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
AFUA_1G13730
Ribosome biogenesis [BR:
afm03009
]
Eukaryotic type
Pre-60S particles
RNases
AFUA_1G13730
Transfer RNA biogenesis [BR:
afm03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
AFUA_1G13730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
3510193
NCBI-ProteinID:
XP_752743
UniProt:
Q8TFZ1
LinkDB
All DBs
Position
1:3654510..3658387
Genome browser
AA seq
1058 aa
AA seq
DB search
MGVPALFRWLSNKYPKIISPVIEELPYEVNGEEIPVDITKPNPNGEEMDNLYLDMNGIVH
PCTHPEGKPPPANEQEMMVEIFKYTDRVVNMVRPRKLLMIAVDGVAPRAKMNQQRARRFR
SAQEAKEADEKKEEFRKMLAKQNGNKVDEELQEEVVKKTWDSNVITPGTPFMDILAASLR
YWIAYKLNTDPAWEKLKIIISDATVPGEGEHKIMEFIRSQRAAPEHDPNTRHVIYGLDAD
LIMLGLATHEPHFRVLREDVFFQESRARTCHLCGQQGHKAEECRGQAKEKNGEFDEKQKG
SSLKPFIWLHVSILREYLAAELYVPHQPFPFDLERALDDWVFMCFFVGNDFLPHLPSLDI
RENGIDTLIAIWRDNIPVMGGYLTEDGHVDLKRAQLILQGLAKQEDAIFRRRRQAEERKL
ANEKRRKQEAKAREEERARKRRRSSPTYEPMDSPVGHRAPRGGGDAAPPNQLELITPSRG
ELSRQTRELTHSMVVNRGAVYRANMANKSAAAVLKSKLMQGSQNGQNGEEKSEGATTNND
EPSQDQPDQTEQTSPSVLGKRKADLVEEEDTDAGTPGRDSPAVPVAAKEDELPPDTVRLW
EEGYADRYYEQKFGVDPQDKEFRHKVARAYAEGLAWVLLYYFQGCPSWTWYYPYHYAPFA
ADFVDIGDMEITFDKGVPFKPFEQLMGVLPASSNHAIPKVFHDLMSSPDSEIIDFYPEDF
AVDLNGKKFAWQGVILLPFIDEKRLLAAMEKKYPLLTEDEKLRNSVGREVLLISEAHPLY
QDLVANFYSKKQGVQKYKLNMRISDGLAGKVERNEAYIPHSSLPSSLEEYGMPSLEDDRS
LTVNYEIPKSNHVHKSMLLRGVKFNPPALDNADIQAVKHKAQNSGRSYGGAPLRGGQKGG
RINYASDRPNPFAAHLDPGFIPPVPGNVGGGPIMPSGWVPPIPGSAGFSRGPPPPPHGGM
SGSHHRPPYGQGPGQYQGNHGQGDHYGQGQQGYYNQSSYYNQSNQYNGRSSDHGGSGGYR
GGGGYHRGGNYRGGGYRDQRQYNQDQYSSRNSGGYGRY
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgggagttccggcattgtttcgatggctttccaacaaataccccaagatcatctccccg
gtcattgaagagttgccgtacgaagtcaacggcgaagaaattcccgttgacatcactaaa
ccaaaccccaatggagaagagatggataatctctacttggatatgaatggtatcgtccat
ccatgtacccatcctgagggcaagcctccaccagcgaatgagcaggagatgatggtggaa
atcttcaagtacactgaccgcgtggtgaacatggtccgtcccaggaagcttctgatgatt
gctgttgatggtgtcgcgccgcgagccaagatgaaccagcaacgagcacgtcgattccgg
tcggcccaagaggcgaaagaggcggacgaaaagaaggaggagtttcgcaagatgcttgct
aaacagaacggcaacaaagtggacgaagagttacaggaagaggttgtcaagaaaacatgg
gatagcaatgtcattactccaggaacaccgttcatggacattctcgctgcatctctccgc
tactggattgcttacaagttgaatactgacccagcttgggagaagcttaaaatcattatt
tcggatgcgactgtacccggagagggcgagcacaagatcatggaatttatccgatcacaa
agggcggcacccgagcacgacccgaacactcgccacgttatctatggattggacgccgat
ttgatcatgctgggtcttgctacccatgaaccccatttcagagtattgcgtgaagacgtc
ttcttccaggagtctcgggcacgaacctgccatctctgtggtcaacagggtcacaaggca
gaggagtgcaggggtcaggcgaaggagaagaatggggaatttgatgaaaagcagaaaggt
tcctctctcaaaccattcatctggctccatgtttccatcctcagagagtatctcgctgcc
gagctgtatgtgccgcatcaaccattcccctttgacctcgaacgggctttggatgattgg
gttttcatgtgcttctttgtaggaaatgacttcctgcctcacctaccgtcattagacatc
cgtgagaatggtatagatactctgattgcaatctggcgcgataacattcccgtcatgggc
gggtacctaaccgaggatgggcatgtcgatctgaagcgggctcagctcattctgcaggga
ctcgcaaagcaggaagatgccatcttccggcgtcgtagacaagcagaggaaagaaagctg
gccaacgagaaaagacggaagcaggaagcaaaggctcgagaagaagaacgagccaggaag
cgacgaagaagctcccccacttatgagcccatggactcacccgtcggtcaccgtgctccc
cgaggtggtggtgatgcagcgccgccgaatcaattggaacttatcacccccagtcgagga
gaattgtctcgacagacaagggaactcactcacagcatggtagtcaatcgcggcgctgtt
tatcgggccaacatggcaaataagagcgcggcggccgtcttgaagagcaagctaatgcag
ggctctcaaaatggtcaaaatggtgaggagaaatccgagggggccacgacaaacaatgat
gagccttcacaggatcagccggatcagacggagcaaacttcgccatcggtccttggcaag
agaaaggccgatctcgtggaagaggaggatacggacgcaggaactccaggcagagactcg
cctgctgtgcctgttgctgccaaggaggatgagctgcctcccgacacagttcgtctgtgg
gaggaaggatacgccgaccggtactacgagcagaagtttggcgtcgacccccaggataag
gaatttcgccacaaggttgcgcgggcatacgccgagggtctcgcatgggttctactgtat
tatttccaaggatgcccgtcctggacttggtactatccgtaccattacgctcctttcgcc
gcagattttgtggacattggcgatatggagataaccttcgacaagggagtgcccttcaaa
ccatttgaacagttgatgggagttctcccagcctcctccaatcacgctattcccaaagtt
ttccacgaccttatgagcagcccagatagtgaaatcattgatttctatccggaggatttt
gctgtggatttgaatggcaagaagttcgcttggcagggtgtgattctactacccttcatt
gacgagaagcggcttcttgccgccatggaaaagaaatacccgcttctcactgaagacgaa
aagctccgcaacagcgtgggacgagaggtgttgctgatttcggaggctcatccattgtat
caagacctggtagccaatttctattcgaagaagcagggcgtccagaagtacaagttgaac
atgcgtataagtgacggtttggcgggcaaggtcgagcgtaatgaggcctatattcctcat
agctctctgccatcgtcactcgaggaatacggcatgccgagtttggaggatgatcggtcc
ttgactgtgaactatgagatcccgaagtcaaatcacgttcacaagtccatgcttcttcga
ggagtcaaattcaaccctccagcgttggataacgcagatatccaagcagtcaagcacaag
gctcaaaactctggaaggtcgtatggcggtgcccctttgcgcggtggacaaaaaggtggc
cgtatcaactatgcaagcgacaggcctaatcctttcgctgcgcatctcgaccctggtttc
ataccgcccgtccctggtaatgttggtggcggtcctataatgccttctggctgggttcca
cccattccagggtccgctggcttctccagaggtcctccccctcctccacatggaggaatg
tccggttcgcatcatcggcctccatacgggcaaggacccggtcagtaccaaggcaaccat
ggccagggcgaccactatggtcagggccagcaaggatactataatcagtcctcatattac
aaccagtccaatcagtataatggcaggtcctccgaccatggtggcagcggaggatacaga
ggcggcggaggataccatcgcggaggtaactatcgcggaggcggttatcgcgatcagcgc
caatataaccaagaccagtactcctccagaaactcaggtggatacggtcgttactga
DBGET
integrated database retrieval system
