Aspergillus fumigatus: AFUA_1G14680
Help
Entry
AFUA_1G14680 CDS
T01017
Name
(RefSeq) DNA-dependent RNA polymerase II largest subunit, putative
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
afm
Aspergillus fumigatus
Pathway
afm03020
RNA polymerase
afm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AFUA_1G14680
09124 Replication and repair
03420 Nucleotide excision repair
AFUA_1G14680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afm03021
]
AFUA_1G14680
03400 DNA repair and recombination proteins [BR:
afm03400
]
AFUA_1G14680
Enzymes [BR:
afm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AFUA_1G14680
Transcription machinery [BR:
afm03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
AFUA_1G14680
DNA repair and recombination proteins [BR:
afm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
AFUA_1G14680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
HOATZ-like
Motif
Other DBs
NCBI-GeneID:
3509860
NCBI-ProteinID:
XP_752837
UniProt:
Q4WRY3
LinkDB
All DBs
Position
1
Genome browser
AA seq
1750 aa
AA seq
DB search
MSNVYFPYSKAPLRTIKEIQFGLFSPEEIKRMSVVHVEYPETMDEQRMRPRTKGLNDPRL
GTIDRQWNCETCEEGQKECPGHFGHIELATPVFHIGFLTKVKKLLETVCHNCGKIKADTS
DSKFLEALRMRDPKRRFDHIWRLSKDVLICEADPPPDEDEPFSKESSKPLRRHGGCGNAQ
PTIRKEGITLVGTWKPNKSMMDEDEMQQPEKKVITPQMALNVFRNISHEDVRIMGLSNDY
ARPEWMIITVLPVPPPPVRPSVLVGGSTSGQRGEDDLTYKLAEIIRANQNVQRCEQEGAP
EHVVREFESLLQYHVATYMDNDIAGQPKAMQKSNRPVKAIRSRLKGKEGRLRQNLMGKRV
DFSARTVITGDPNLSLDEVGVPRSIARTLTYPEVVTPYNIEKLQQLVANGPNEHPGARYI
VRDNGERIDLRHARRAGGQQLLYGWKVERHLMDGDIILFNRQPSLHKESMMGHRVRVMPY
STFRLNLSVTTPYNADFDGDEMNLHVPQSEESRAELKQLALVPLNIVSPQRNGPLMGIVQ
DTLCGIYKICRRDVFLTKEQVMNIMLWVPDWDGVIPPPAILKPRPRWTGKQMISMALPSG
LNLLRVEKDNSSLAEKFSPLTDGGLLIHGGQLMYGMFSKKTVGASGGGVIHTIFNEYGPD
TAVAFFNGAQTIVNYWLLHNGFSIGIGDTIPDAITIQRIENCVRERKKEVEAITASATEN
TLEPLPGMNVRETFESKVSRALNNARDEAGSETEKSLKDLNNAIQMARSGSKGSTINISQ
MTAVVGQQSVEGKRIPFGFKYRTLPHFTKDDYSPESRGFVENSYLRGLTPTEFFFHAMAG
REGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDVIQFIYGEDGLDGAHIEN
QRVDVIRCSDEKFRERFRVDLMDPERSLGPEVLEQANEIAGDVEVQRYLDEEWEQLLKDR
AFLRTVAKEDDEMMQLPINVQRILETARSTFRIREGAISDLHPAEVIPQVRSLLDRLLVV
RGDDPISREAQENATMLFKAQLRSRLAFRRLVTEYSMNKLAFQHVLGAIESRFAKAAANP
GEMVGVLAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNVATNIKTPSMTVYQ
LPHRCHDKESAKQLRSVVEHTSLRSVTEATEIYYDPDIQTTVIENDRDMVESYFIIPEDV
TDATSRQSKWLLRIILSRPKLLDKGLTVQDVAAKIKQAYPKDIAVIFSDNNADEQVIRIR
QIQDYKEDEDDEDIEYDVTLKKLEQHLLDTLTLRGVQGVERAFINEKSKVRVLEDGSLFA
SKTDPLCKEWVLETSGSSLGEVLAVPGVDATRTYSNQFIEVFEVFGIEAARTAVLRELTQ
VLAFDGSYVNHRHLALLVDVMTVRGYLTPVTRHGINRADNGALMRCSFEETVEILLEAAA
FGELDDCRGVSENLILGQMAPAGTGEFDLYLDQNLLNTVVSNNARFGVMGTIGAKDAIIS
DGAATQYDTGSPMQESAFIGTPDPESAFSPIRQAGAESPGGFTEYQPTGGFGGGFSPAAT
SPAGYSPSSPFSANPTSPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAY
SPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIG
GAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAF
SPSYVPSSSA
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgtttactttccctactccaaggcgccgttgcgcaccatcaaggagattcag
tttggtctattctctccggaggagatcaaaaggatgagcgtggtgcatgttgagtatcct
gagacgatggatgaacaacggatgcggccgcggacaaagggtttgaacgatcctcgtttg
ggtacgattgaccggcaatggaactgtgagacctgcgaggagggtcaaaaggagtgtcct
gggcactttggacacatcgagctggcgacaccagtctttcacatcggtttcttgaccaaa
gtcaagaagctccttgagactgtctgccacaactgtggcaagatcaaagccgacacgtcc
gactccaaattcttagaagccctacgcatgagagatcccaagcgacgtttcgaccatatc
tggagactctctaaggatgtgttgatctgcgaagcggaccctccaccggacgaggacgag
cctttttcgaaagagagctccaagccactccggaggcatggtggttgcggtaacgcccag
cccacgattcgtaaagagggtatcactttggttggaacatggaagcccaacaagagcatg
atggatgaggatgagatgcagcagccagaaaagaaagtcattactcctcagatggccttg
aatgtcttccgcaacatttcccatgaagatgttcggataatgggcttaagtaatgactac
gctcgtcctgaatggatgatcatcactgttctgcctgtcccccctcctcctgtccgtcct
agtgttctcgtcggtggtagcaccagcggccagcgcggtgaggatgatctgacttacaag
ttggctgagattatccgagcgaatcagaatgtccagcgatgcgaacaggaaggcgctcct
gaacacgtcgtacgcgagtttgagtcgcttttgcagtaccacgttgccacctacatggac
aatgatatcgctggtcagccgaaggctatgcagaaatcgaaccgaccggtcaaggctatc
cgaagccgtttgaagggtaaggagggtcgtcttagacagaacttgatgggcaagcgtgtc
gatttctccgctcgtactgtcattactggcgatccgaacctgtctctagacgaggtcggt
gttccaaggagtatcgctcggactctgacctaccccgaagttgttactccgtacaacatc
gagaagctgcagcagcttgttgccaatggcccaaacgaacatcctggagctaggtatatc
gtgcgggacaacggggagcgtattgacttacgccatgcccgaagagctggaggccaacaa
ctgctgtatggctggaaagtcgagcggcatcttatggatggcgatatcattctgttcaat
cgtcaaccttccctgcacaaggagtctatgatgggtcatcgtgtccgtgttatgccgtat
tcgactttccgactgaacctgtctgtcaccaccccttataacgccgatttcgacggtgac
gagatgaacttgcacgttcctcagagcgaggagtctcgcgcagagttgaagcagctcgcc
ttggtccctctgaacatcgtgtctccccagcgtaatggtccccttatggggatcgtgcaa
gatactctctgcggtatttacaagatttgccgacgtgatgtcttcttgaccaaagaacag
gtcatgaacattatgttgtgggttccagactgggatggagttatccctccgccagccatc
ttgaagcctagacctaggtggactggaaagcagatgataagcatggctcttccatctggg
ctcaatttgttgcgtgtggagaaagataactctagtctggcagagaagttctcgcccttg
acagacggtggtctgctcatccacggtggacagttgatgtatggaatgttttccaagaag
actgttggtgctagcggtggtggtgtcattcacactatctttaatgagtacgggccggat
actgcggtggccttcttcaatggggcacaaaccattgtcaactactggctgcttcacaat
ggtttcagtataggtattggtgacaccattcccgacgcgatcacgattcagcgaatcgag
aattgtgtgcgagagaggaagaaggaagtcgaagctatcacagcaagcgctacggagaat
accttggagcccctgcctggtatgaacgttcgagagaccttcgagagcaaggtttcgcgt
gcgctcaacaatgctcgtgacgaagctggtagtgagactgagaagagtttgaaggatctg
aacaacgccatccagatggcccggtctggatctaagggttcgacgatcaatatctctcag
atgactgctgttgtgggtcagcagtccgtcgaaggcaagcgtattcctttcggattcaaa
tatcgtactcttccccatttcaccaaggatgattactctccggaatctcgcggatttgtg
gaaaactcttatctgcgtggcctaaccccaactgaattcttctttcatgccatggccggt
cgagaaggtctgatcgatactgccgtcaagactgccgaaactggttatattcagcggaag
ctggttaaggccttggaagaggtcatggttaagtatgacggtactgtcagaaactctctg
ggtgatgtgatacaattcatctacggagaagacggtcttgatggtgctcacatcgaaaac
cagagggtcgacgttatcagatgctctgatgaaaagttcagagagcgattccgtgtggat
ctcatggatcccgagaggagcctgggacctgaagtcttggaacaggccaatgaaattgct
ggcgatgttgaagtccagagatatctcgacgaagaatgggagcaattgctcaaagaccgg
gcattccttcgcactgtcgcgaaagaagacgatgagatgatgcagcttcccatcaacgtg
cagagaatccttgaaactgccaggagcacattccggatacgtgaaggggccattagtgac
ttgcatcctgctgaggttatccctcaagtccgctctctgctcgatcgtttgctagttgtg
cgcggtgacgatccaatctcgcgcgaggcgcaggagaatgccacaatgttgttcaaggca
cagcttcgcagtcgccttgcattccgcagacttgtgaccgagtactcaatgaacaagctc
gccttccagcatgttctcggtgctatcgagagcagatttgctaaggctgctgctaaccca
ggtgaaatggttggtgtgctagccgctcagtctattggtgagcccgctacacagatgacc
ttgaatactttccactttgctggtgtctcgtcgaagaacgtcaccctcggtgttcctcgt
ctcaaggaaattcttaacgtcgctaccaacataaagacgccatctatgactgtttaccag
ttgccgcacagatgccacgataaggaatctgctaaacagttgcgaagcgttgttgagcat
accagcctgagatccgttacagaagccactgagatctactacgacccggacatccagacc
acagtcattgaaaatgatagggatatggtcgagtcctacttcatcattccggaggatgtc
acagacgccacttctcggcagtccaagtggttgcttcgtatcattctcagtcggccaaag
ctcctggataagggtctcacggtgcaggatgttgctgccaagattaagcaggcttatccc
aaggatatcgcggttatcttcagtgataacaacgctgatgagcaggtcatccgtatccgt
caaatccaggattacaaggaagacgaggatgacgaggacattgaatacgacgtcactctg
aagaaactggaacagcatcttctggatactctcactctccgtggtgttcagggagtggaa
cgggccttcattaacgagaagagcaaagtccgtgttcttgaggatggcagtctgtttgca
agcaagaccgatcctctctgcaaggagtgggttcttgaaaccagtggttcttccctcggt
gaggtcctggctgtccctggagtggacgctacacgtacgtactcgaaccagtttatcgag
gtctttgaagtctttggtattgaagctgcccgtacggccgtgcttcgggaattgacccaa
gtgcttgccttcgacggttcctatgtaaaccaccgtcatctggcgcttctggtcgacgtc
atgactgtgcgagggtatctgacaccggtaactcgccacggtatcaatcgtgctgacaat
ggtgctctgatgcggtgttcgttcgaagagacggtggagattctattggaagctgcagct
ttcggagagcttgacgactgccgcggtgtatcagagaatctgatcctgggacagatggcg
cctgctggtacaggagagtttgacctctaccttgaccaaaacctcctcaacactgttgtg
tcgaacaatgcacggttcggtgttatgggaaccattggggccaaggatgccatcatttcc
gacggcgctgccacacagtacgatactggttcgcccatgcaggaaagtgcattcattggt
acccccgacccggagtcagcattctcgcccattcgccaggcaggtgccgagtctcctggc
ggcttcaccgagtaccaacctacgggtggctttggaggtggtttcagccccgctgctaca
agcccggcaggctattcacccagcagcccgttcagcgccaatcccacgtctcctgggtac
tccccaacttcaagctattcacctacatctcctggcatgggcatcaccagtcctcgtttt
atgacgtcgcctggcttctctccggccagcccatcgttcgctccaacctcgcctgcatat
tcaccgacgtcgccggcatatggacaggcatccccgacgtctccgtcctactctcccaca
tcgccagggttctcaccaacatcgcccaactacagccctacgtcccccagcttcagcccg
gcttctcctgcgttcagccctacgtcgcctagctacagcccgaccagtcctgccatcggt
ggcgccggtcgacacctatctcctacttcacctacatctcccaagtacacgcctacatct
cctggctggtctcctacgagcccgcagacgtactcacctacgtcgcctaactttgctgga
tcgccgacgtctccgggcggccccacctcccctggatacagtcctacgtcccccgccttc
agcccttcgtatgtaccctcgtcttcagcttga
DBGET
integrated database retrieval system
