Aspergillus fumigatus: AFUA_2G15210
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Entry
AFUA_2G15210 CDS
T01017
Name
(RefSeq) small nuclear ribonucleoprotein (LSM2)
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
afm
Aspergillus fumigatus
Pathway
afm03018
RNA degradation
afm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AFUA_2G15210
09123 Folding, sorting and degradation
03018 RNA degradation
AFUA_2G15210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afm03019
]
AFUA_2G15210
03041 Spliceosome [BR:
afm03041
]
AFUA_2G15210
Messenger RNA biogenesis [BR:
afm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
AFUA_2G15210
mRNA degradation factors
5'-3' decay
Lsm complex
AFUA_2G15210
Spliceosome [BR:
afm03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
AFUA_2G15210
Complex C
U2 snRNP components
AFUA_2G15210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
LRR_9
Hfq
SM-ATX
Gemin7
Motif
Other DBs
NCBI-GeneID:
3513709
NCBI-ProteinID:
XP_755856
UniProt:
Q4WZZ7
LinkDB
All DBs
Position
2:4030834..4031185
Genome browser
AA seq
91 aa
AA seq
DB search
MLFFSFFKTLTNQTVTIELKNDIRIRGTLKSVDQYLNIKLDDVDVLDLDKYPHLSSVKNM
FIRGSVVRYVMLPRSEVDVGLLEDATRRGTS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcttcagtttttttaagaccctcaccaaccagaccgtcacaatcgagctcaag
aatgacattcgtatccgcggaaccttgaagtcggtcgatcaatacctcaacattaagctc
gacgatgtcgacgtcctcgatttagacaagtaccctcatctctcctccgtgaagaacatg
ttcatccgtggcagcgtggtgcgatatgtcatgctgccgcggtcagaggttgatgttggt
cttttagaagacgctacgcggagaggtacgtcgtga
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