Aspergillus fumigatus: AFUA_4G12390
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Entry
AFUA_4G12390 CDS
T01017
Name
(RefSeq) cell differentiation protein (Rcd1)
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
afm
Aspergillus fumigatus
Pathway
afm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFUA_4G12390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afm03019
]
AFUA_4G12390
Messenger RNA biogenesis [BR:
afm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
AFUA_4G12390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
CEND1
Motif
Other DBs
NCBI-GeneID:
3509488
NCBI-ProteinID:
XP_751592
UniProt:
Q4WQD0
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All DBs
Position
4:3239828..3241228
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AA seq
394 aa
AA seq
DB search
MLQTQSQHVFSHQHQYPQADPSWLQHQQQAQQQHHPAQPHPHQAQQQHSSLVAQHAQVQA
AAAAAAAAQQQHYNRIAMAGNGGAGNAAQGAGAGALNGENALSGAVSVMDGGISDENRKV
FIWIAELLDPNRREAALMELSKKREQVPELALVIWHSFGVMTALLQEIISVYPLLNPSQL
TAAASNRVCNALALLQCVASHNETRTLFLNAHIPLFLYPFLNTTSKSRPFEYLRLTSLGV
IGALVKNDSSDVINFLLTTEIIPLCLRIMETGSELSKTVAIFIVQKILLDDIGLAYICAT
YERFYAVGTVLSNMVTQLVEQQTVRLLKHVVRCFLRLSDNSRAREALRQCLPEPLRDATF
SSVLRDDAATKRCLAQLLINLSDNVSDGASGVTM
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagacacaatctcagcacgtcttttcccaccagcatcagtatccgcaggctgat
ccttcttggttgcagcatcagcaacaggcacagcaacagcaccatccggcccagccccat
ccacaccaagcccaacagcagcattcgtcgctagtggctcaacatgctcaagttcaggct
gctgccgccgcagcggctgccgctcaacagcaacattataaccgcatcgctatggctgga
aacggcggtgctgggaacgccgcgcaaggtgccggtgccggagccttgaatggagaaaac
gctttgtccggtgcggtgtcggtcatggatggtggcatcagcgatgagaatagaaaggtc
ttcatttggattgcagagcttcttgatccgaatcgtcgagaggcggccctgatggaactc
agcaagaagagggagcaggttcccgagttggcactggtcatctggcattcattcggagtc
atgactgctctgctccaggaaattatctccgtttaccccctgctgaacccttcccagttg
accgctgcggcgtcgaaccgagtttgcaatgcgctagcgttgttacaatgtgttgcgtct
cacaacgagactcgcaccctttttctgaatgctcacatccctctttttctttacccattt
ctcaacacaacctcgaagtctcgaccctttgaataccttcgacttacttcactgggggtc
atcggggcgttggtaaagaatgattcgtccgatgtgatcaatttccttctaacgaccgag
atcatccctctgtgccttcgcatcatggagacaggatcggagcttagtaaaaccgtcgcc
attttcattgtacagaaaatacttcttgacgatatcggtcttgcatatatttgtgccaca
tacgaacggttttatgctgtgggaacagtgttgagcaatatggttacccagcttgtggag
cagcagactgtgagattgctgaaacatgttgtccgctgcttccttcgactcagcgacaat
agcagggctcgtgaagctttacgccagtgcctccccgaaccgctccgcgacgccactttc
tcctctgtactccgcgacgatgcggccacgaaacgctgccttgcacagcttctcatcaat
ctctctgataatgtttccgacggcgcttcaggagttaccatgtag
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