Aspergillus fumigatus: AFUA_4G12680
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Entry
AFUA_4G12680 CDS
T01017
Name
(RefSeq) DNA repair protein Rad50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
afm
Aspergillus fumigatus
Pathway
afm03440
Homologous recombination
afm03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
afm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AFUA_4G12680
03450 Non-homologous end-joining
AFUA_4G12680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afm03032
]
AFUA_4G12680
03400 DNA repair and recombination proteins [BR:
afm03400
]
AFUA_4G12680
DNA replication proteins [BR:
afm03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
AFUA_4G12680
DNA repair and recombination proteins [BR:
afm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
AFUA_4G12680
BRCA1-C complex
AFUA_4G12680
NHEJ (non-homologous end-joining)
MRX complex
AFUA_4G12680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_15
AAA_21
AAA_29
KNOX2
DUF4200
AAA_13
AAA_16
Motif
Other DBs
NCBI-GeneID:
3508988
NCBI-ProteinID:
XP_751564
UniProt:
Q4WQF8
LinkDB
All DBs
Position
4:complement(3320188..3324835)
Genome browser
AA seq
1312 aa
AA seq
DB search
MILSLKLNNVRSFDNTRSETIQFHTPLTLIVGYNGSGKTTIIECLKYATTGDLPPNSKGG
AFIHDPKLCGEKEVLAQVKLSFKSTSGAKMVATRSLQLTVKKTTRQQKTLEGQLLMVKDG
ERTAISSRVAELDQIMPQYLGVSRAVLDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAMK
YTKAIDNIKALRKKQNEELAKYKIMEQHAKEDKEKADRAEKRSIKLQDEIESLRAETHQL
SQEMRRVAELADKAWKESESYAQILGTLEGKRIEAKSLQSTIDNLKRHLVELDDPDEWLQ
SNLEQFESKQLQYQQQEEAQKENYMEIKDRIEQARQKLGVKQAEYGKYENDKANFERQVE
RRQRMTREIARSHNIRGFDNIQDQSDIDDFMRKIRKLLKEQNQALERVKREAQTELREVQ
STLNEIGQRKSALQESKNAAKRQIGANDKEASNYQAKLNEIDVDEGVQAAVEANIEDISS
RLNHAKDRARSASLDKEIQDMNSELHALEDEGARLNAELIEATKRAGDFARLDHLKKELK
ERERSLETMKAAHGERLAKYIGANWNPATLEQEFQRVLEEETRNVSNAESQRDGVNRELE
QVEFNLKTSKKTLAQRQKELNSCATEIREAINEEPEEYPDALKQRQAQLDVARRDAEQSA
GLGDYFMRCLETAKQVKACRLCQRAFRADAEFTVFQKRLEGLVKKAQIGVEEEDVERFEA
ELDAARAVSTAYDTWTRLSKTEIPDLEKEEDQYALQRDELLNQLENHDKIVSEKIEKKRD
VEALSKTVNTIVRYESEIKTIRSQIQDLSSNQQDNTATRTLEDIQEEIAGIGDKTRALKK
TLSKLINDREQARTEMNNLELQLRDARSKLDNVKFQLERKSDLLARIEEYKNLNNQQREA
ITKADRDIEELTPELLKYQAQYDDISQRVEAREREMQQGISQLSERIRQLDLATEEIDSY
NERGGPSQLERSRRELQTIEAEISQLEAEQANITKEINKISAQLKDSENTKRQYSDNLTY
RQATRALAEVSAEIENLAAQNAEVDRSRFKEESERRTREYNALAAKQASKMGEMKSKDDQ
LMQLLADWNTDYKDAASKYKEAHIKVETTKAAVDDLARYGGALDKAIMKYHSLKMEEINA
IIGELWQKTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKSGAEMDMRGRCSAGQKVLA
SIIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRARQQQANFQLIVITH
DEEFLRHMQCGDFSDYYYRVSRNEKQKSIIERQSIAEVSYDYLRCFHIALTY
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgattttgtcacttaagctcaacaatgttcgttccttcgacaacacccgcagcgagacc
atccaatttcacacgcctcttacattgatcgttggctataatggctcagggaagactaca
atcattgagtgcctcaaatatgctacgaccggcgatctcccacccaacagtaagggcggt
gctttcatccatgaccccaagctctgtggagagaaagaagtccttgcccaagtaaaatta
tccttcaagagtacatctggagcgaagatggttgctacacggagcctacaacttacagtg
aagaaaaccactagacaacagaaaaccctcgagggacagcttctgatggtcaaggatggt
gaaaggacagctatctcatcccgagtagcagagctggaccaaatcatgcctcagtatctt
ggcgtttcgagagctgtcctagattccgtcattttctgccaccaggatgagagtctttgg
cccatgagcgagccctcggtgctcaagaaaaaatttgatgagatctttgaggctatgaaa
tatacgaaagccatcgacaatatcaaagccctccggaaaaagcagaatgaggagctggca
aaatacaaaatcatggaacagcatgccaaagaagacaaagaaaaagctgatcgtgcggag
aaaagatccatcaagctacaggacgagattgagtccctccgcgctgaaactcatcagctc
tcccaagagatgcgccgtgttgcggaactcgccgacaaagcttggaaggagtctgaaagt
tatgctcagatcctagggactctggaaggaaagcgtatcgaggcaaagagtttacagtca
acaattgacaatctcaaaaggcaccttgttgaacttgatgatccggatgagtggctacaa
tcgaatttagaacagtttgagtccaaacagctccaataccaacaacaagaggaagctcaa
aaggagaactacatggagatcaaggaccggattgagcaagcccgtcagaagttgggagtc
aaacaagccgaatacggaaaatacgaaaatgacaaagccaacttcgagcgccaggtagaa
agaagacagaggatgacaagggaaattgctcgcagtcataacatccgaggctttgacaat
atccaggatcaatctgatattgacgacttcatgcgaaagattcggaagctgttgaaggaa
caaaatcaagcgctggagcgcgttaagcgtgaggcgcaaacggagctacgcgaagtacag
tctactctaaatgagattgggcagcgaaaatctgcattgcaggaaagtaagaatgcggcc
aagcgtcaaattggtgcaaatgacaaggaagcctccaattatcaagcaaagctcaacgaa
attgacgtcgacgagggcgtccaagctgcggttgaagcaaacattgaggacatttcatct
cgtctaaaccacgccaaagatcgtgctcggtcggcttctctggacaaagagattcaggac
atgaactcagaactccatgccctcgaggatgaaggcgcccgcctcaatgctgaattgatt
gaggccacaaagcgagctggggattttgcccggttagatcatctcaagaaggaactcaaa
gagcgagaacgcagcttggaaactatgaaagccgcacatggcgaacgtcttgcaaagtac
atcggtgcgaactggaaccctgccactctagagcaagagttccagcgcgtcctggaagag
gagaccagaaacgtctcaaatgccgaaagtcaacgtgacggcgtcaacagggagctggag
caggtcgaattcaacctcaagacctccaagaagactctggctcagcgacagaaagagctc
aatagctgcgccacagaaattcgcgaagccatcaatgaggaacccgaagagtatcccgat
gcactcaaacaacgacaagcgcagctggatgtcgctagaagggacgccgagcaaagtgcc
ggactcggcgactactttatgcgttgtcttgagactgccaagcaggtaaaagcctgtaga
ctgtgccaacgagcgttcagggccgacgcagaattcactgtcttccagaaacgactagag
ggcttggtgaagaaagcacagattggtgtggaggaggaagatgttgaaagatttgaagcc
gaactcgacgcagcccgtgcagtaagtacagcttacgatacgtggactcgcctttccaaa
accgagattccggatctggagaaagaagaagaccagtatgctctccagcgggatgagctc
ctgaaccaactggagaatcatgacaagatcgtcagcgagaagattgaaaagaagagagac
gttgaggctttgtcaaaaaccgtcaatactatcgtgcgatacgagagcgaaattaaaact
atccggtcccagatccaggatctgtcctccaatcagcaggataatactgctacacgtact
ctggaagacatccaagaggagattgccggcattggcgacaagactagagctctgaaaaaa
accttgtccaagctcataaatgatagagagcaggcacgaactgaaatgaataacttagaa
ttgcagctccgagatgctagaagcaagcttgacaatgtgaagttccaactagagagaaag
tcagacttgcttgctcgaattgaggaatataaaaacctcaacaaccaacaacgggaagcc
atcacaaaggctgacagagatatcgaggagctgacaccggagttgctgaaataccaagct
caatacgacgatatcagccagcgggtcgaggcccgagaaagggagatgcagcaaggcata
tctcaactgtcggaacgcatacgccaattggatctggcgacggaggagattgattcttac
aacgaacggggtgggccgagtcagttggagcgtagtagacgcgagctccaaacgatcgag
gctgaaattagccagcttgaagcggaacaggctaatattacaaaagaaatcaataagatc
tcggcacaactcaaagacagtgagaacacaaaacgccaatactccgacaacctgacatat
cgccaggcgacccgagcactagcagaggtgtccgcagaaattgaaaacttagctgctcag
aacgcagaggtggaccgaagccgcttcaaggaggaatcagagcgccgaacccgcgaatac
aacgcgcttgctgccaagcaagcgagcaagatgggagagatgaagtccaaggatgatcag
ttgatgcagcttttggcggattggaacacagactacaaagacgccgcttcgaagtacaag
gaagcgcacattaaggtagagactaccaaggctgctgttgatgatttggctcggtacgga
ggtgctttggacaaagccatcatgaagtaccactcgttgaagatggaggagatcaatgcg
atcatcggagagctctggcaaaagacttacagaggtacggatgttgacacgatcctcatc
cgctccgataacgaaaatgcaaaaggaaaccgatcctacaactatcgcgtctgcatggtc
aaatcgggcgcagagatggatatgcgtggacgctgcagtgcaggacaaaaagtactcgcg
agtataatcattcgcttggccctggcagagtgtttcggcgtcaattgcggcctgatcgca
ctcgatgaaccgacaaccaatcttgaccgggacaatatccgctctctcgctgagtccctg
cacgacatcattcgggcgcgtcaacagcaggcaaattttcaacttattgtgattacccac
gatgaggagttccttcggcatatgcaatgcggcgacttcagtgattactattaccgggtc
tcccgcaatgagaaacagaagtcgatcattgagagacagtccattgcagaggtgagttat
gattacctgcgttgctttcatatcgccctcacatactga
DBGET
integrated database retrieval system
