Aspergillus fumigatus: AFUA_5G07180
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Entry
AFUA_5G07180 CDS
T01017
Name
(RefSeq) THO complex component (Rlr1)
KO
K12879
THO complex subunit 2
Organism
afm
Aspergillus fumigatus
Pathway
afm03013
Nucleocytoplasmic transport
afm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AFUA_5G07180
09122 Translation
03013 Nucleocytoplasmic transport
AFUA_5G07180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afm03019
]
AFUA_5G07180
03041 Spliceosome [BR:
afm03041
]
AFUA_5G07180
Messenger RNA biogenesis [BR:
afm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
AFUA_5G07180
Spliceosome [BR:
afm03041
]
Complex C
Other components
EJC/TREX
AFUA_5G07180
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AFUA_5G07180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
SpoVT_C
Motif
Other DBs
NCBI-GeneID:
5077164
NCBI-ProteinID:
XP_001481502
UniProt:
A4D9I8
LinkDB
All DBs
Position
5:1781990..1789479
Genome browser
AA seq
2473 aa
AA seq
DB search
MAPGAGGKRKRGDRSWSGDSGNDGLRPSPHRPGNLNMAQHNHGSHSNHPRDFPETRGRVR
RQASRGGRNSNNLSRRPSNDIPNVNTGQKDSPMSPPARDVPDSSQTNGFPPTVAAASIPP
SPSPAPTVQQTPAQAQASPKPQSQSLPSPAPPVRPPPGPPPPYDYEYVTESVVEDWMSTG
RQKVIKDGVQARDQEDASTLASIYQEIIRAAFYGRLSPTDAGSVIKEIIGEEVAAQDIDM
VDDRQPSAALDTRSLFLDTLSILTDADPSNPALRPLVFSTGINAALLRLQLETPVLQTLG
LVRDTFTRIGIRKQTNLLYRQSNYNLLREESEGYSKLLTELFTTSNNEPPTSEVVEDTFE
RVKAMIGAFDMDVGRVLDVTLDVFAAVLVKQYRFFVKLLRVSSWWPKDDISRTLGGNDRD
SGIPNWALPGSAGWVTTDEERAEIMRANEQRDREFWNRVREIGIRAFFEIGRKPISEEER
KRIFPESTTLSEEEMETRKWIEETGTLPPKGNRVAAQLLGFKLRFYSSKARDKSDILPDN
LIYLAALLIKVGFISLRDLYPHLWRPDELMDELKEEKMKEKAERERAARPGGGVNALMMA
GALSDDTLPIPRIRESEQRSSTPAKDQEADKATPQKTDEDELPEPSDQKVMLLKSLLAIG
ALPEALFILSKFPWLMDAYPELPEYIHRILHHSLSKVYNSLRPLPTVEELREQQQIPSQD
QGGLAKGQIRLTSAPPRRVLRWAQLDKDDTNDGTDYRFYWDDWADNIPVCQSVDDVFALC
SSFLNISGHKIGLDPSLLAKLARIGKFSLTQDDSTENKARWQDLCKRLLVPAISLTKANP
GVVNEVFDLLRFFPRATRYNIYAEWYSGQTSRLPDIKSAFDQARAETKDVLKRLSKTNIR
PMARALAKIAFANPGIVINVAISQIESYENLIEVVVECARYFTYLGYDILTWALINSLGQ
KGRSRVQEGGLLTSRWLNALATFAGRTYKRYSIMDPTPVLQYVVEQLRQNNSTDLIVLEQ
MISSMAGIITDTNFNDAQIQAMAGGEILQSQTILQLLDKRHESKTTSKRLMKALTVSKLA
GQLLVAIAQERWTCIYKATEGDSELKLLGNVFDEIHRILAQYLDLLRSNMSVDEFDSFVP
DLASLIKDFGIQPEIAFWIRRPSVSRKVADAEKAMQEEEAAAAAARAREIEAAPIKSEDD
KMETTDEGEMNGPADESAENSMDVDKEQGMTNTEGDSNPTSGQPEQPASSSPTLNPVMQD
LEDQVKSALTPETWGVVGLHFYVIFWQLSLYDVHIPQKAYEDEIERQKKKVMAINSDRSD
ISMAGTQRKEREKKQITQLQERILEENKAHLKAYGQTRARLQKEKDRWFAGMRGKHDSLN
VSLLEQCFLPRLLLSPIDAFYCFKMLKFLHTSGTPNFRTVGLLDQLFREQRLTALIFQCT
SREADNLGRFLNEVIRDLGRWHADKAVYEKEAFGTKKDLPGFAINVDPEGKPTTFLEYED
FRRLLYKWHRLLASALKICLNGGEYMHIRNAISVLKAVVQHFPAVNWIGRDMLTSVNNLS
QNDERDDVKIPAASLIGDLNRREKKWMLPQAFMISNQPASKGPAPAAGKPGTPGTPRPRS
TTPASLNAAAPEFKPPPSAEPEGGPRQEVTKKSEVEDGEIEDAKMTDVSAKDIETSNQVA
QKPAEKAEAASRQGEESIVTQPPETTSTQPTSEKPVASTEAYTGVELPSHPRISDSPAAS
KTATKASESGRLPNVPRRPESDRAPFSSPNMRPQSQMPSRPFRGDDGRLPPRSDIMDARR
DRQSDFPRGGRFGDHEHSRSFEQPGPEGRSYGRLERDFPSRPPADEPFRGPPYRDGRLTR
EADRPDRAGRLRGPPDSREAPSSRSVPPGPQTHPDRADLIQEHPERGGDGYRRGEQMRQE
KDDRRALPTRALSPPRADLPNRPPPDDRRFPSHAQGRSRYDDTPTGPRNDRPSRAPMDAS
EPREPGADMSHGRLRQPEPASDIPSGPRGRNPSGRGGRTASGLSHATPSSPAGAADRQPP
TGPGRQGMRGAPEQSSSTGPSSPTIEKLDASGIHPDRLKALQQQASEDTFGGSPRSHQSL
SPASTGPPSGPRSGVAPLSGPNSNNRGPPSGPAFGGERGRGDKRFAGINNMLQQSGGPGD
RGGPGTQIRGRGANRQSTMGGPSPQNTRPGSPGASEEGSRSGLSSHGRPDLLIGRPSASF
TEDDGPSKGRLGGGRREPAEETGSESRRSGRASHDRERERDRDRDRDRDRERDRDRDRER
ERRGGADEEGGRSSSHREERERVREFERERSRRGDTGGSASREERYDSREASRRGTGSRE
ENRRRDRREREENPEFGPSSHEHEGRLRPPSSLGGGPPPPPPPPPLPGNAEEDRRWGAGS
GGGNGGRELRDRDRDRNRDRGRDRDYTRDGGSGGPHRKRGRPGGDDGPGEGGGGGGRGGM
RMGGESKRPRRGQ
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atggctccaggtgccggaggaaagaggaagagaggcgacagatcgtggtctggcgactcc
ggcaacgacggactacggccatccccccaccgaccgggcaatctcaacatggcgcaacac
aaccacggctcgcattcaaatcaccctcgcgactttcccgaaacgcgcggtcgcgtacga
agacaggctagtcgaggcgggaggaacagtaataaccttagccgacgacctagcaatgac
attccgaacgtcaacactggacagaaggattcgcccatgtctccgcctgccagagatgta
cctgattcgagccagacaaatgggtttccaccgacggtagctgcagctagtataccgccc
tcgccgtctcctgcgccgactgtacagcagacgcccgcacaagcgcaggcatccccgaag
cctcagtcacagtcactgccttcgcctgcgcctcccgtcaggcctccgccaggtccaccg
ccgccttacgattacgaatatgtcactgagagtgtagttgaagattggatgtcaacagga
agacagaaggtcatcaaggatggcgtgcaggctagggaccaggaggatgcgtcgacattg
gcttcgatctaccaggaaatcatcagagctgcattctacggccgtttgtcgcccacagac
gccggatcggtgatcaaggagattattggtgaagaggttgcagctcaagatatcgatatg
gttgacgaccggcagccctcagcagctcttgacacgcgctctttgttcttggacaccctg
tctattcttaccgatgccgatcctagcaatcctgccctgaggccgctggttttctccaca
ggaatcaatgctgcccttctgcgcctccaactcgaaactcccgtccttcagacgctgggt
cttgttcgtgatacctttactcgcatcggcattcgtaaacaaaccaatcttctgtaccga
cagtccaactacaatttgctacgggaggagtcggaagggtactccaagctgttgaccgag
cttttcactactagcaacaatgaaccacccaccagcgaggtcgtagaagatacctttgag
agggtcaaggctatgattggagcctttgatatggacgttggccgagtcttagatgtcacg
cttgatgtcttcgccgctgtgcttgtgaagcaatatcgcttcttcgttaagcttctccga
gttagttcctggtggcccaaggacgatatttcccgcactcttggtggaaatgaccgagac
tctggtataccgaattgggcactaccaggttctgcagggtgggttacaacggacgaggaa
cgagccgagatcatgcgagccaatgagcagcgagaccgcgaattttggaaccgagtcaga
gagattggtattcgagcatttttcgaaattgggaggaagccgatatccgaagaggagaga
aagcggatatttccagagagcacgactctgtcagaagaagagatggaaacacggaaatgg
atcgaagaaacaggaactctacccccaaaagggaacagggtcgcagcgcagcttcttggt
ttcaagcttcgcttctactcgtcgaaagcgcgggacaagtcagatatcctccccgacaac
ctcatctatcttgcagctcttctgatcaaggtcggtttcatatcgcttcgcgacttgtac
cctcatctctggagaccggacgaattgatggacgagctgaaggaggaaaagatgaaggaa
aaagcagaaagagaaagagccgcgcggccgggtggaggtgtaaatgctttgatgatggct
ggcgctctttcggacgatacgttgccaattccgcgcattcgggagtcggaacaacggtca
tccacccctgcaaaagaccaagaagcggacaaagcaactccacagaagacagacgaagat
gagctgccagagccctcggatcaaaaggttatgctgctaaagagcctgctcgccatcgga
gccctcccagaggctctttttatcctaagcaaatttccttggcttatggatgcctaccct
gaactccccgaatacattcatcgtatcttgcatcatagtttgagcaaagtgtataactca
ttgcgtcccttgccgacggtcgaggagctcagggaacaacagcagatacccagccaagat
cagggaggtctggcaaaaggacagattcggctgacttcagcgcctccaagacgagtcctt
cgctgggctcagctcgacaaagacgacacgaatgatgggaccgactatagattctattgg
gatgattgggccgataatatcccagtctgtcaatctgtggacgatgtttttgccctttgt
tcatcgtttctgaatatctctgggcacaagattggacttgaccccagcctgctagctaag
ctggcgaggattggcaaattcagtctcacccaagatgattccaccgagaacaaagcgcgc
tggcaggatctctgcaaacgtctccttgtgcctgcgatcagtttgaccaaggcaaaccct
ggtgttgtgaatgaagtattcgatcttcttagattctttccaagagcaacgcggtacaac
atctacgcggaatggtattctggacaaacatctcgactgccggatatcaagtcggctttt
gatcaagcaagagctgagacgaaagacgttctcaagaggctgagcaaaacaaacatacga
ccgatggctcgcgcattagcgaagattgcctttgctaatcccgggatcgtgatcaatgtc
gccattagccagatcgagtcctacgagaatcttatagaagtggtcgtggagtgtgcgcgc
tacttcacatacctcggatatgacattctcacctgggccctaatcaactcgcttggacaa
aagggacgaagccgagtgcaagaaggcgggctgttgaccagtcgatggctaaacgcgctg
gcaacgttcgctggcaggacctacaagcgctactctatcatggatcctacccctgttctt
cagtacgtcgttgaacaacttcgacagaacaactccacggatcttatcgttttggagcag
atgattagctctatggctggtatcatcacagatacaaacttcaacgatgcgcaaatccaa
gctatggccggtggcgagatcctccagtcacagaccatcctacaactcctggacaaacgg
cacgaatcgaagacaacttcgaaacgattgatgaaagccttgactgtatcgaaactggcc
ggacaactgcttgttgcaatcgcccaggaacgctggacgtgtatctataaggcgacggag
ggagattccgaactcaagttactaggcaacgtctttgacgagattcatcgcatcctagcg
cagtatctggatctcctacgcagcaacatgtcagtggatgagtttgattcctttgttccc
gacttggcttctcttatcaaggacttcggtattcagccggagattgcgttttggatccgc
cgacctagcgtttcccgtaaggttgccgatgctgaaaaggcaatgcaagaggaggaagca
gcagccgccgctgcgagggctcgcgaaatcgaagcagcgcccatcaaatccgaggatgac
aaaatggaaacgacagatgagggtgaaatgaatggtcctgcggatgaatccgccgagaac
tctatggatgttgacaaggagcaaggaatgacaaacactgaaggagacagcaatcctact
tcgggacaaccagagcaaccggcatcctctagtccgactctgaacccagtgatgcaggat
ctcgaggatcaggttaagtccgcattgacccctgagacttggggagtggtcggcctgcat
ttttacgtcatcttctggcaactgtcactttacgacgtgcatatccctcagaaggcttac
gaagacgaaattgaacggcagaagaaaaaggtcatggccatcaacagcgatcgatcggac
attagcatggccggtactcagcgaaaggaaagagaaaagaagcagataacccaactccag
gaacgcatcttggaggaaaacaaggctcatcttaaggcttacggtcagacaagggcaagg
ctgcagaaggaaaaggaccggtggttcgccggcatgcgcgggaagcatgattccctcaac
gtcagcctactggaacagtgtttcctgccccgtttgctgctgtcacccatcgatgcgttc
tactgctttaagatgctcaagttcctacacacgtccggcacaccgaactttcgtaccgtt
gggctgttggatcagttgttccgcgagcaaagacttaccgccctgattttccaatgcacc
tcacgcgaagcggataatcttggccggttcttgaacgaggtcattcgcgaccttggtcgc
tggcatgcggacaaggctgtgtatgagaaggaagcttttggtacgaagaaagacctgcct
ggctttgccatcaatgtcgatcccgaaggcaaacctaccacgttcttggagtacgaggac
ttccgccggctgttgtataaatggcaccggcttctggcttccgctctcaaaatctgtttg
aatggaggtgaatacatgcatattcgtaacgcgatcagtgtgctcaaggcagtcgtgcag
catttccccgctgtcaactggattggtcgtgatatgctcactagcgtcaacaatctcagt
caaaacgatgagcgagacgacgtgaagatccctgcggcgtcgctgattggcgatctgaat
cgccgagagaagaaatggatgctaccacaagccttcatgatttcaaaccaaccagcgagc
aagggacctgcgccagcagctggaaaacccggaactcccggaactccacgccctcgatct
actacgccggcttccctaaatgctgcagcgcctgagttcaagcccccaccatccgcggaa
cctgaaggcggtcctagacaggaagtgactaagaagtccgaggtagaggatggggagatc
gaagacgctaagatgacagatgtatcagctaaggacattgagacaagcaatcaagttgcc
cagaaaccagcagaaaaagctgaagctgcgtcacgccaaggcgaagagtccatcgtcaca
cagcctcctgagaccactagcactcaacctacgagcgagaaacccgttgcttccactgag
gcttatacaggggtcgaactgccatcgcatccacgaatttctgactcgccagccgcatca
aaaacggccacgaaggcttcggaatctggacgccttcctaatgttcccagacgcccggaa
tcagatcgagctcctttcagcagtcccaatatgcgcccccaatcacagatgccaagtcgc
ccgttccgtggagatgatggtcggttgccgccgcgctctgatatcatggatgctcgacga
gacaggcagtcagacttccctcgaggcggccgattcggtgatcatgaacatagccgatcg
ttcgagcagcctggaccagaaggcagaagctacggtcgtctagaaagagacttcccatcc
agaccccctgcggacgaacccttccgtggccctccatatcgtgacggacgtctcacacgt
gaggcggatcggccggaccgtgctggacgcttgcgcgggcctccagattcccgtgaagct
ccttcgtcacgatctgtaccacctggcccacagacccaccctgatcgtgcagacttgatt
caagaacatcctgagcgcggtggagacggatatcggcgcggggagcaaatgcggcaagaa
aaggatgatcgaagagctttgccaacacgggctctctcccccccgagggcggacctcccg
aaccgtccgccacctgatgatcgccgcttcccctcgcacgctcaagggcgttcgcgctat
gatgatacaccaaccggaccccgtaatgaccggccatcccgggctcctatggatgcttcc
gagcctagggagcctggtgccgatatgagccatggccgattacgtcaaccagaacccgca
tccgacatcccgtctggtccacggggaagaaatccatccggacggggtggacgcaccgcc
tctggcctctcgcatgctacaccgtcttctcctgccggggccgcggatcgtcaaccgccc
actggaccaggtcgccaaggaatgcgaggcgcgcctgaacagtcgagttcaaccgggccg
tcgtcgccaacaattgagaagctcgatgccagtggaattcatccagatcgtctcaaggct
ctgcaacagcaagcgagtgaggatacttttggtggcagtccacgctctcatcaatctcta
tctcccgcatcaactggtccgccatccggacctcgtagtggcgtcgcgccactatcgggc
ccgaactcaaacaatcgcggaccaccttcaggaccagctttcggtggtgaacgtggaagg
ggtgacaagcggttcgcggggatcaacaacatgctccagcaatcaggcggacctggagac
cgtggaggccctggcacacaaatccgtggccgcggcgcgaatagacagtcaactatgggt
ggtccttcgccccaaaatactcgaccaggatcaccgggagcttcggaagagggcagccga
tcgggtttatccagtcacggccgtcctgatcttctgatcggccgaccttcagcttccttc
acagaagacgatggcccttccaagggtcgcctcggcggcggacgaagggagccagcggaa
gaaaccgggtctgagtctagacggtctggcagggcctcacacgaccgggaacgggaacgg
gaccgggaccgagatcgggatcgggatagagagcgtgaccgtgatcgcgatcgtgagcgt
gaacgccggggtggtgcggacgaggagggaggccgtagtagcagtcatcgagaggaacga
gaacgggtccgagagtttgagcgtgagcgtagccgacgcggtgatactggaggaagtgcg
tctcgagaggaacgatatgattctcgagaagcctcgcgacgcggaaccggctcgcgcgaa
gaaaaccgtcgccgagatcgccgcgagagggaagagaaccccgaatttggaccgagcagc
catgagcatgaaggccgtctccgacctccttcttcgttaggtggaggaccaccgccgccg
ccaccacctcctcctctcccgggtaacgctgaggaagatcgacgatggggtgcaggcagc
ggtggcggcaacggcggccgcgaattacgggacagggatcgagaccggaatcgcgaccgg
ggacgggatcgggactacactcgtgacgggggaagcggggggccacaccgaaaacgaggc
cggcctggaggagatgatggacctggtgaaggaggaggtggtggaggccgaggtggcatg
cgcatgggaggggaaagcaaacggccccgacgagggcaatga
DBGET
integrated database retrieval system
