Aspergillus fumigatus: AFUA_5G11910
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Entry
AFUA_5G11910 CDS
T01017
Name
(RefSeq) DNA repair and transcription protein (Xab2)
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
afm
Aspergillus fumigatus
Pathway
afm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AFUA_5G11910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afm03019
]
AFUA_5G11910
03041 Spliceosome [BR:
afm03041
]
AFUA_5G11910
Messenger RNA biogenesis [BR:
afm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
AFUA_5G11910
Spliceosome [BR:
afm03041
]
Complex B
Other components
Prp19-related factors
AFUA_5G11910
Complex C
AFUA_5G11910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
TPR_2
NRDE-2
RPN7
Motif
Other DBs
NCBI-GeneID:
3511486
NCBI-ProteinID:
XP_753460
UniProt:
Q4WVF4
LinkDB
All DBs
Position
5:complement(3080506..3083286)
Genome browser
AA seq
839 aa
AA seq
DB search
MDRTAASRPDLYLIADQDTVYEQDLFRAPGSIKPWLAYIEYKQQNGTLYEQAFVMERACK
QLPRSYKLWKMYLEFRINHLRGRNATKYRAEYQKVNALFERALILLNKMPKIWEMYLSFL
LQQPLVTQTRRTFDRALRALPITQHNRIWKLYKAFARSASGQTAVKIWARYMQIHPENAE
DYIELLVELGQYTEAVKRYMEILDDPRFQSKKGKSNFQLWTEMVDLLVSKAKQIRTGPQV
GIDVDAILRSGIDRFADQRGKLWAGLATYWITKGNFEKARDVFEEGITTVMTVRDFTLIF
DAYVEFEESIIGSLMEAAAVRADKGNVDEDADFDLDLRMLRFEQLMDRRPFLVNDVLLRQ
NPNNVIEWEKRVALWGDNKEEIVNTYTAAIAAINPKKAHGKFSELWVNYAKFYESGGDLD
TARVIFDKAVKVPFKSVAELADTWCEWAEMELRSENFDKAVDIMAKATQAPKKSTVDYFD
ETLSPQQRVHKSWKLWSFYVDLVESVATLEETRKVYERIFELRIATPQTVVNYANLLEEH
KYFEDSFKVYERGLDLFSYPVAFELWNLYLTKAVDRKIGIERLRDLFEQALDGCPPKFAK
PLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRFEMFEFYITKSASNFGLTSTRPIYE
RAIAALPDQEAKEMCLKFADMERRLGEIDRARAIYGHASQFCDPRTNAGFWQKWEAFEVQ
HGNEDTFKEMLRIKRSVQAQYNTDVNFIASQAIARSQQRAQEGAREREGEEAGTDASKER
ADAMAALERQARAPIGFVAASTGPEGGNRPPPPGQQQQPQPSAPVNPDAIDLDDDMDAE
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggaccgaacggctgcctcaaggccagacctttacctgattgccgatcaggacactgtc
tatgaacaggatctttttcgggctcctggcagcatcaaaccatggcttgcctacatcgaa
tacaaacagcagaatgggacactctacgagcaggcctttgttatggagcgtgcctgtaaa
cagcttcccagatcatacaagctttggaaaatgtatctggagtttcgaataaaccacctt
cggggtcgtaatgcgacaaaataccgcgctgaatatcagaaagtgaatgcactcttcgaa
cgagcactcatactgctgaataaaatgccgaaaatctgggagatgtatctgtcgtttctg
ctacaacaaccattggtgactcagactcgaaggacatttgaccgcgcgcttcgtgctcta
ccgatcactcagcacaaccggatctggaaattgtacaaagcctttgcgcgctcagcatct
ggacaaacagctgtgaagatatgggctcgttatatgcaaattcatccggaaaatgctgaa
gattatatcgagttgctcgttgaactgggtcagtataccgaagcggtcaagcggtacatg
gaaatcctggacgatccgcgatttcagtcgaagaaaggaaagagcaactttcagctttgg
actgagatggtcgatctgctcgtctctaaagcgaagcaaattcggaccggtccgcaagtc
ggcatcgacgttgatgccatccttcggagtggaattgatcggtttgcggatcagagaggg
aagctctgggctgggttggcgacttattggatcacgaagggtaattttgagaaagcgcgc
gatgtgttcgaagaaggtattaccaccgtcatgaccgtccgcgacttcaccctgatattc
gacgcctatgttgaatttgaagagtcgatcattggaagcttgatggaggccgcagcggtc
cgggctgataaagggaatgttgacgaagacgctgattttgatcttgatctacgaatgctg
agatttgaacaacttatggatcgccggccattccttgtcaacgatgtcctgttacggcaa
aatcccaacaatgtcattgaatgggagaagagggtggctctgtggggtgacaacaaagaa
gaaattgtcaacacgtacaccgccgccatagctgctatcaacccaaagaaagctcatgga
aagttttctgaactctgggtcaactacgccaagttctacgagagtggtggagatttggac
acggcccgagttatatttgacaaggctgtcaaagttcccttcaaatctgtcgctgaattg
gcagacacatggtgcgaatgggccgagatggaacttcgaagtgagaatttcgataaggca
gtcgatatcatggccaaggctacgcaagcaccgaagaagtctacagtggactatttcgat
gaaactctctcgcctcagcagcgcgttcataagagttggaagctttggagtttctacgtg
gatctggttgagagtgttgcaaccttggaagagacgaggaaggtatatgagaggattttt
gaactgcgcatcgcaacacctcagactgtggtcaactatgccaacctattggaagagcat
aaatactttgaggattccttcaaagtatacgaaagaggactggatctcttcagctatccg
gtcgctttcgagctctggaacctttacctcaccaaggcggtggatcggaagattggcatt
gagagattgagagacctcttcgaacaggctcttgacggatgtcccccgaagttcgcaaag
ccactctatctgatgtatggcaaccttgaagaagaacggggtctggcccgacacgcaatg
agaatctatgagcgtgcaactcgagcagtttccgacgaggacagatttgaaatgtttgaa
ttttacatcaccaagtctgcctccaactttggtttgacatccacacggcctatctatgaa
cgcgccattgcggccttgccagaccaggaagccaaggagatgtgcctcaagttcgcagac
atggaaaggagacttggcgaaatcgatcgcgcacgtgcgatctacggacacgcttctcag
ttttgcgacccccgtaccaacgccggcttctggcaaaagtgggaggcattcgaggtccaa
catggaaacgaagataccttcaaggagatgcttcgtatcaagcgaagtgttcaggcacag
tacaacaccgatgtcaacttcattgcttcccaagcaatcgcccgcagccagcaacgcgcc
caggaaggcgcccgggagagggaaggcgaggaagcaggcacggatgcctctaaggagcgc
gcagacgccatggcagcgctggaacggcaagctcgcgcccccatcggcttcgttgccgcc
agcactggacccgagggcggcaatcgtccccctccgccgggtcagcagcagcagccgcaa
ccctctgcgcccgtcaacccagacgctattgatcttgatgatgatatggatgccgaatag
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