Aspergillus fumigatus: AFUA_8G04590
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Entry
AFUA_8G04590 CDS
T01017
Name
(RefSeq) pre-mRNA splicing factor
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
afm
Aspergillus fumigatus
Pathway
afm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AFUA_8G04590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afm03041
]
AFUA_8G04590
Spliceosome [BR:
afm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
AFUA_8G04590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
PRP4
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_HPS5
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR19_1st
Tricorn_2nd
WD40_like
Exonuc_VII_L
PRTP
Motif
Other DBs
NCBI-GeneID:
3504638
NCBI-ProteinID:
XP_747266
UniProt:
Q4WCF6
LinkDB
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Position
8:1047790..1049620
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AA seq
536 aa
AA seq
DB search
MHPSRQAYVEESEDTEMGIDLANVPVDRDYDIPSAAAGIPAERASAILSQFERKRRAAAM
AVPTDDNRVRARLRELGEPITLFGEGPVDRRDRLRELLTDLAERQEAAAAEGDVSMRGTT
EETEAAEEEAEQQEEFYTEGSQELLNARKAIARYSLPRAKARVERLREESTIPLRTHIKH
RKAIKEKLQGFDLYGSQIAGDRPVSICRFAPDGKTIAAGNWGGGIRLLTVPNLEEKSNLN
GHTDRVGGLAWFPGATLPSSNVSESSVNLVSGGGEGNVALWSLDKDTPLATLSGHSGRVC
RTEFHPSGRYIASASFDTTWRLWDVETTVELLLQEGHSREVYTVAFNNDGSLLASGGLDS
IGRIWDLRTGRTVMILEGHVREIYGLDWGVDGYRVLSGSGDGWIKCWDLRQVRNIGGIGA
HKSVVSDVRWYKGTESAASYLPSTESNGRMDVDSNPTLTTSEQSTPATPIQPKKSGTFFV
SSGFDKNVNIFSADDWSLVKSLSGHAGNVLSTDISDDAQWIASCGHDRTVKLWGIE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcacccttcaagacaggcgtacgtggaggagtccgaggatacggaaatgggcattgac
ctggcaaacgtccccgtcgaccgcgactatgatattccctctgctgcagcgggcataccc
gcggaacgagcatctgccattctatcacaattcgagcgcaagcgacgggcagctgccatg
gcggttccgacggatgataaccgtgtgcgcgcacgactgcgagagcttggtgaaccgatc
actcttttcggagaaggtcccgtggaccggagagacagactgcgtgagcttctgacggat
ctggccgagaggcaggaagcagcagctgcggaaggtgatgtctccatgcgaggtaccaca
gaggaaactgaagcggcagaagaggaagcagaacaacaggaagaattctacacagagggt
tcccaggagctactcaacgcccgaaaagcaattgcccgctattccctaccccgagcgaaa
gcacgagtagaacgcttacgagaggaatctacaatcccattgagaacacatatcaaacac
cgcaaagcgatcaaagagaagttgcaagggtttgacctttacgggtcgcagattgcgggc
gaccgccctgtgagcatttgtcgctttgcgccagacggaaagacgatcgctgcgggcaat
tggggtggtggtatccggctgctcacggtgccgaatctggaggagaagtcaaacctcaat
ggacatacggatcgtgtcggtggattggcgtggttccccggtgcaacgcttccttcctcg
aatgtgtccgagtcgagtgtcaaccttgtctccgggggcggcgagggcaacgtggcgctg
tggtcattggataaagatacaccactagcgacactgtcaggccacagtggccgtgtatgc
cggacagaattccatccttcagggcggtacatcgcatctgcttcgttcgacacgacatgg
cgcttgtgggacgtcgagacaacagtcgaactccttcttcaggagggtcattcacgagag
gtttatacggtggcatttaacaatgatggttctctgctggctagcggcggtctggacagc
attggtcgaatctgggatctacggacgggccgcacggtcatgatccttgagggacatgtc
cgagaaatctacggtctcgactggggtgtagatggataccgtgtcttgtcaggttcgggg
gatggctggatcaagtgttgggacctccgccaagtacgcaatattggtgggatcggcgca
cataaaagtgtcgtgtcggatgtacggtggtacaagggcactgagtcggctgcatcttat
ctgccgtccactgaaagcaatggacgaatggacgttgacagcaacccgacactcacaacg
agcgaacagtcaacaccagcaaccccaattcaaccaaagaagtcaggcacattctttgtc
agcagtgggttcgacaagaacgtcaatatcttcagcgcggatgactggtctctagtcaag
tccttgagtggccatgcaggcaatgtgctcagtacagacatcagtgatgatgcgcagtgg
attgccagttgcgggcacgatcggactgtgaagctctggggcatagagtga
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