Acidimicrobium ferrooxidans: Afer_0089
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Entry
Afer_0089 CDS
T00956
Name
(GenBank) penicillin-binding protein transpeptidase
KO
K05364
penicillin-binding protein A
Organism
afo
Acidimicrobium ferrooxidans
Pathway
afo00550
Peptidoglycan biosynthesis
afo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
afo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Afer_0089
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
afo01011
]
Afer_0089
Peptidoglycan biosynthesis and degradation proteins [BR:
afo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Afer_0089
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
ACU53060
UniProt:
C7M1L1
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All DBs
Position
complement(92695..94176)
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AA seq
493 aa
AA seq
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MRRRIGIVTLVLLLAFALVFVQLNNLQVVQASKLADAPGNTAGMQRIFSENRGPILTADG
QVMAESVPLPGGNSYQRTYPAGSLYGDITGYFSLIYGLSGLEYELNRYLVPHVVVPDSIS
QLLGSSEQTDSVVTTINSRLQRTAYQALGSLKGAVIALDPRTGAILALASNPTYDPAPLA
AQSTTTEIAAWKADLANPGDPLLDRAISRAYPPGSTFKMVTTSAIFDHDPKLALINFPAV
SQIPLPETTHELHNYAYESCGGTLTQTLPVSCDTAFAQLGLKLGATALSEEATAFGFNQV
PPIDLPGAAASTFPPASFFKQNLPQLAFSAIGQGNVTATLLQMALVGAGIANHGAIMTPH
VLNRVLNPQDAVVTAYHPHVWRVATSPSTAAQVTQLMIDVVRYGTAVGIQIPGVQIAAKT
GTAQTTLTSHSSVLGASDNWMVAFAPAENPRVVVAVVVPKQPGLSANPTGAQYAGPVVKA
MLEAALGITGGQG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaggcgcatcgggatcgtcacgctcgtactgctgctcgcctttgccttggtcttc
gtgcagctcaacaacctccaggtggtccaggcgtccaagctcgccgacgcgcccggtaac
accgcgggcatgcagcgcatcttctcggagaaccgagggccgatcctcaccgccgatggc
caggtcatggccgagtccgtgccgcttcccggtggcaacagctaccagcgcacctacccg
gccggatcactctacggcgacatcaccggctacttctcgctcatctacggcctgtcaggc
ctcgagtacgagctcaaccgctacctcgtcccgcacgtggtggtacccgactcgatctcg
cagctcctcgggtcgagcgagcagaccgactcggtcgtcaccaccatcaactcgcgcctc
cagcgcacggcgtaccaggcgctcgggtcactcaagggagcggtcatcgcgctcgatccc
cgaaccggtgcgatcctcgcccttgcatcgaaccccacctacgatcctgcgccgctcgcg
gcacagtcgacgacgaccgagatcgcggcctggaaggccgatctcgccaatccgggtgat
ccgctcctggatcgggcgatttcgcgcgcctatccgcctgggtccaccttcaagatggtg
acgacctcggcaatcttcgaccacgacccgaaactcgccctgatcaacttccctgcagtg
tcgcagatccccttgcctgagaccacgcacgaactccacaattacgcctacgagtcctgt
ggcggtacgctcacccagacgctccctgtgtcgtgtgacaccgcctttgcgcagctcggc
ctcaagctcggcgcgaccgcgctcagcgaggaggccacggccttcggattcaatcaggtt
cctccgatcgacctgcccggagcggctgcgtcgaccttcccacctgcatcgttcttcaag
cagaatctcccccagctcgccttcagcgcgatcggccaaggcaacgtcaccgcgaccctc
ttgcagatggcgctggtcggagccggtatcgccaaccacggcgccatcatgaccccgcac
gtcctcaaccgtgtcctcaatcctcaagacgcggtcgtcacggcctaccacccgcacgtt
tggagggtcgccaccagtccgtccacggccgcacaggtcacacagctgatgatcgacgtc
gtccgctacgggacggcggtcggcatccagatcccaggtgtccagatcgctgcgaagacc
ggtacggcccagaccacgttgacgagtcactcctcggtccttggtgcatcggacaactgg
atggttgccttcgctccggccgagaacccgcgcgtcgtcgtcgctgtcgtcgtacccaag
cagcctgggctgtccgcgaacccgacgggggctcagtatgcgggcccggtcgtcaaggcg
atgctggaagctgcgctcggtatcacgggagggcagggatga
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