Acidimicrobium ferrooxidans: Afer_0190
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Entry
Afer_0190 CDS
T00956
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
afo
Acidimicrobium ferrooxidans
Pathway
afo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
afo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Afer_0190
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
afo01007
]
Afer_0190
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afo03016
]
Afer_0190
Enzymes [BR:
afo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Afer_0190
Amino acid related enzymes [BR:
afo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Afer_0190
Transfer RNA biogenesis [BR:
afo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Afer_0190
Prokaryotic type
Afer_0190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF7310
GAS
DUF5930
DASH_Spc19
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
ACU53159
UniProt:
C7M261
LinkDB
All DBs
Position
complement(194661..195977)
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AA seq
438 aa
AA seq
DB search
MIDLTELRAHPDDVARRLASRGIDPEVVAHLATIDQQLRAVITERDQLRAELRARSRDIA
EARRSGRDATELQEGARALGNRLDELEQRVDTLTGDRDAIWLTLPNIPSPNAPIGEDEHD
NRVVRQWSPETGTVEPDVDLTSTTPSHRRVPHFEIGRELGILDLERAAKLSGSMFALYRN
LGARLVRALTNFALDAHAEAFEEIHPPTLVRRETMVATGHLPKFADDAYVMERDDLYAIP
TAEVPLTSLYRDEILDLAMLPMRLTAATPCYRREAGSAGRDTRGLLRLHEFDKVEILALV
APEDATSMHLELLGRAEALLQRLGLIYRVVDLCTGDLGQSSARTFDLEVYAPGVDAWLEV
SSVSWFSDYQARRANVRFRREPAARPEYVHTLNGSALAWPRVIAALLEQGREPDGSIRLP
DALAPYLGTSRLEAPKTA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacctcacggagctgcgcgcccaccccgacgacgtcgcacggcgcctcgcgtcc
cgcgggatcgaccccgaggtggtcgcccacctcgccacgatcgatcagcaactccgagcg
gtgatcaccgagcgtgaccagcttcgagccgagctgcgtgcccgctctcgcgacatcgcc
gaggctcgccgcagcggtcgagacgcgaccgagctgcaagagggcgcccgagcgctcggt
aatcggctcgacgaactcgagcagcgcgtcgacaccttgaccggcgatcgcgacgcgatc
tggctgaccttgcccaacatcccgagcccgaacgcacccatcggcgaggacgaacacgac
aaccgtgtggtacgccaatggtcgccggagaccggcacggtcgagcccgacgtcgatctc
acgtccaccacacccagccatcgtcgcgtaccgcacttcgagatcggtcgcgagctcggc
attctcgatctcgagcgcgcagcgaagctctcgggatcgatgttcgcgctctatcgcaac
ctcggggcacgcctcgtccgcgctctgacgaacttcgcgctcgatgcccacgcagaggcc
ttcgaagagatccatcctccgacgctggtccgtcgcgagacgatggtggcaacgggccac
ctccccaagttcgccgacgacgcctacgtgatggagcgcgatgatctctacgcgatcccg
acggccgaggtgccgctcacgtcgctctaccgcgatgagatcctcgaccttgcgatgctc
cccatgcgcctcaccgccgcgaccccgtgctatcggcgcgaggcagggtccgcagggcgc
gacaccagaggcctgctgcgtctccacgagttcgacaaggtcgagatcctggcactcgtc
gcacccgaggatgccacgagcatgcacctcgagctgctcggtcgggcagaggcgctgctc
cagcgccttggcctgatctatcgtgtcgtcgacctgtgcactggggacctcggacagtcg
tccgcccgcaccttcgacctcgaggtctacgcgcccggtgtggacgcgtggctcgaagtc
tcctcggtgtcatggttcagcgactatcaagcgcgccgggccaatgtgcggttccgccgg
gagccggcggcgcggccagagtacgtgcacaccctcaacggctcggcgctcgcgtggcca
cgcgtcatcgctgccctcctcgagcaaggtcgcgaacccgatgggtcgatacgcctgccc
gatgcgctggccccctacctcggcacctcgaggctcgaggcacccaagaccgcttga
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