Acidimicrobium ferrooxidans: Afer_0248
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Entry
Afer_0248 CDS
T00956
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
afo
Acidimicrobium ferrooxidans
Pathway
afo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
afo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Afer_0248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afo03021
]
Afer_0248
Transcription machinery [BR:
afo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Afer_0248
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ACU53217
UniProt:
C7M2H3
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All DBs
Position
252139..253152
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AA seq
337 aa
AA seq
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MRAVLRGSAPHRFVHPASQESSGGGELVTKERQEREDEDLVRLYLGDIGSHELLTKDDEA
ELGRRMDRARDAQRQLDAGVKEPARRAELEELVRQGEEAKRAFIQANLRLVVSIAKRYQA
SGLPLLDLIQEGNMGLIHAVEKFDWRKGFKFSTYATWWIRQAITRGIANTGRTIRLPVHA
GDSLSRVQRAQVQLEVRLGRAPTVRELAAEVDLPYDKLVEALRFRAEPVSLSEPLRDDGD
AELGDVVEDSQSATPFDVAAEHLLPSEVSRLLAPLDGREREILRLRYGLDRGEPRTLEEV
GEYFHLTRERIRQIEARAMSKLRHPSADIGARDLLTG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctgtcctgcgtggctcggctccgcatcggttcgtgcatccagcgagccaggag
tcctcggggggtggggaactcgtgacgaaggaacgtcaggaacgtgaggacgaggacctc
gtccggctctacctcggagacattggcagccacgagctgctcaccaaggatgacgaggcc
gaactcggtcggcgtatggatcgtgcgcgtgacgcccagcgtcagctcgatgccggtgtg
aaggaacctgcgcgcagggccgagctcgaggagctggtgcggcagggagaagaagccaag
cgcgccttcatccaggcaaacctccgcctcgtcgtctcgatcgccaagcgctaccaggct
tccggactacccctgttggacctgatccaagagggcaacatgggtctgatccatgcggtc
gagaagttcgactggcgtaagggcttcaagttctcgacctatgccacctggtggattcgt
caggcgatcactcgaggtatcgccaacacgggccgaaccattcgccttccggtccacgct
ggtgactcgctctcgagggtccagcgagcccaggtccagctggaggtacgactcgggcgt
gccccgacggttcgtgagctcgctgccgaggtggatctgccctacgacaagctggtcgag
gcgcttcgcttccgtgccgagccggtctcgctgtcggagccactgcgcgacgacggtgat
gctgagcttggcgacgtggtcgaggacagccagtcggcgacgcccttcgacgtcgcggcc
gagcacctgctcccgtcggaggtgtctcgtctgctcgctccgctcgacgggcgtgagcgc
gagatcctgaggcttcgctatggtctcgatcgcggggagcctcgaacgctggaggaggtc
ggagagtatttccacctcaccagggagcgcatccgccagatcgaggcgcgcgcgatgtcg
aagttgcggcacccatctgctgacatcggcgcgcgcgacctgttgaccggatag
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