Acidimicrobium ferrooxidans: Afer_0434
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Entry
Afer_0434 CDS
T00956
Name
(GenBank) transcriptional regulator, LysR family
Organism
afo
Acidimicrobium ferrooxidans
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
PBP_like_2
HTH_5
HTH_20
MarR_2
Motif
Other DBs
NCBI-ProteinID:
ACU53402
UniProt:
C7M308
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Position
434176..435108
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AA seq
310 aa
AA seq
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MITVDERRIDPTYLVTLAVVAETHNLSDAAKILGISQPGVSQQLKHLSEAVGQRLHVRSG
HGVELTVAGLDLARRARDVLRSWRGVLDYVESVRQGNDGMLLLAASNTVSAYVVPRWLVR
FRQRYPGVDLRSRSLNSAEVVERVIDGEAEVGVIESPVESLPPELVEIVVGGDRLVYVVS
PAVVSFANNQVVGWGEVARIPLVLREVGSGVRRASEQALRARGLAPRLELELAGGEAVKE
AILQGVGGGFLSSLAVARELATGELVTLVIRELDTIARLFRIICRPKDDLSLPAQRFLEI
AEAVGVAEPV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattacggtcgacgagcgccggatcgatccgacgtacctcgtgacgctcgccgtggtg
gccgagacgcacaacctctcggacgcagcgaagatcctcggcatctcgcagcccggcgtt
tcgcagcagctcaagcacctctccgaagccgtgggccagcgcctccacgtccgctcgggt
cacggggtcgagctgacggtcgcgggtctcgatcttgcgcggcgggctcgtgacgtgctg
cgctcctggcgaggcgtgctcgactacgtcgagagcgtccgccagggcaacgacggcatg
ctgctcttggccgcgtccaacaccgtgtctgcctacgtcgtgccccgctggctggttcgg
ttccgccagcgctatcccggcgtcgacctgcggagccgttcgctgaactcggccgaagtc
gtcgagcgcgtcatcgacggcgaggccgaggtgggcgtgatcgagtcaccggtcgagtcg
ttgccccctgagctggtcgagatcgtggtgggcggcgatcgcctcgtctacgtggtcagt
ccggcagtggtcagcttcgcgaacaaccaggtcgtcggttggggcgaagtggcgaggatc
ccgctcgtgctgcgggaagtgggttcgggtgttcgacgcgccagtgagcaggcactgcgc
gctcgtggactggccccccggctcgagctcgagctcgctggcggtgaggcggtcaaggag
gcgatcctccagggggtcggcggtggcttcttgtcgtcgctcgcggtcgcgcgcgagctc
gcgaccggtgagctggtcacgctcgtcattcgcgagctcgataccatcgctcgactgttt
cgcatcatctgtcggcccaaggacgacctctccctgccggcgcagcgctttctcgagatc
gccgaggcggtcggcgttgcggagccggtctag
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