Acidimicrobium ferrooxidans: Afer_0625
Help
Entry
Afer_0625 CDS
T00956
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
afo
Acidimicrobium ferrooxidans
Pathway
afo02020
Two-component system
afo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
afo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Afer_0625
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Afer_0625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afo03021
]
Afer_0625
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
afo02035
]
Afer_0625
Transcription machinery [BR:
afo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Afer_0625
Bacterial motility proteins [BR:
afo02035
]
Flagellar system
Flagellar assembly proteins
Stator
Afer_0625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_23
NirdL-like_HTH
PhyR_sigma-like
GerE
CT_C_D
Motif
Other DBs
NCBI-ProteinID:
ACU53579
UniProt:
C7LXX1
LinkDB
All DBs
Position
631123..631887
Genome browser
AA seq
254 aa
AA seq
DB search
MSDDEVIESAWRRFKHDGDLEARNRLLEHYASLVRFVASRVAVGLPASVDPNDLASYGTF
GLIDALEKFEPERGIKFETYAITRIKGAIIDELRAIDWVPRSVRAKAKSVEQAYAALEAR
LHRPPTDAEVASELGMSEDELLAIYSKISFLGLVGLDEVVMSGERGEGMTLGDTLADRRQ
SAGGAFEEQERRRMLADSINQLADREKTVLVLYYYEGFTLAEIGRILGVTESRICQIHSK
AVLALRGKLGDLIG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgacgaggtgatcgagtcggcgtggcgccgcttcaagcacgacggtgacctc
gaggcgcgcaatcgcctgctcgagcactacgcgtccctcgttcgcttcgtcgcctcgcgc
gtcgcggtcgggttaccggcgagcgtcgaccccaacgacctcgccagctacggcaccttc
gggctgatcgacgcgctcgagaagttcgagccggagcggggcatcaagttcgagacctat
gccatcacacggatcaagggcgccatcatcgacgagcttcgcgcgatcgactgggtgccg
cggtcggtgcgggccaaggcgaagtcggtcgagcaggcctacgccgcgctcgaggcacgg
ctgcatcggccccccaccgatgccgaggtcgccagcgagctcggcatgagcgaggacgaa
ctgctggcgatctactccaagatctcgttcctcggactcgtcggtctcgacgaggtggtg
atgtcgggcgagcgcggtgagggtatgacgctcggggacacgcttgccgatcgtcgtcaa
tcggccggtggcgcattcgaggagcaggagcgccgtcgcatgctcgccgattccatcaat
cagctggccgatcgcgagaagaccgtcctcgtgctctactactacgaaggtttcaccctg
gcggagatcggccggatcctcggcgtgaccgagagtcggatctgtcagatccactccaag
gccgttctggctctgcgaggcaagctcggcgacctgatcggctag
DBGET
integrated database retrieval system
