Acidimicrobium ferrooxidans: Afer_0863
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Entry
Afer_0863 CDS
T00956
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
afo
Acidimicrobium ferrooxidans
Pathway
afo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
afo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Afer_0863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afo03019
]
Afer_0863
03009 Ribosome biogenesis [BR:
afo03009
]
Afer_0863
Messenger RNA biogenesis [BR:
afo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Afer_0863
Ribosome biogenesis [BR:
afo03009
]
Eukaryotic type
Pre-60S particles
RNases
Afer_0863
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ACU53808
UniProt:
C7LYK0
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All DBs
Position
complement(884753..885319)
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AA seq
188 aa
AA seq
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MLAWMDLEMTGLDPERCVILEIAAIVTDDELETVAELGPLVLHATDEELAVMEPVVVQMH
SANHLLEDVRRASLTIDEAESTVLAFLKAHLPDPHQVPLCGNSIGTDRRFLARHMPKVEA
LLHYRSIDVSSLKELARRWYPEVIEHMPQKNPAHRALDDVRDSIAELRYYRSSMLRPREG
GQVDARGE
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgcatggatggacctcgagatgacaggtctcgaccctgagcggtgcgtcattctc
gagatcgccgccatcgtgaccgacgacgaactcgaaaccgttgccgagctcggcccgctc
gtcctccacgcaaccgacgaggagctggcggtgatggagcccgtcgtcgtgcagatgcac
tctgccaaccacctcctcgaagacgtccggcgagcgtcgctcaccatcgacgaggccgaa
tcgaccgtcctcgccttcttgaaggcccatcttcccgatccccaccaggtgcccctgtgc
ggcaactccatcggcaccgatcgtcggtttctcgcgcgccacatgcccaaggtcgaggcc
ctgctccactaccgatcgatcgacgtctccagcctcaaggagctcgcgcgccgctggtac
cccgaggtcatcgagcacatgccgcagaagaaccccgcgcatcgcgcgctcgacgacgta
cgggactcgatcgccgagctgcgctactaccgcagctctatgctgcgccctcgcgaaggc
ggacaggtcgacgcacgaggcgagtga
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