KEGG   Acidimicrobium ferrooxidans: Afer_0983
Entry
Afer_0983         CDS       T00956                                 
Name
(GenBank) CRISPR-associated protein Cas1
  KO
K15342  CRISP-associated protein Cas1
Organism
afo  Acidimicrobium ferrooxidans
Brite
KEGG Orthology (KO) [BR:afo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afo03400]
    Afer_0983
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:afo02048]
    Afer_0983
DNA repair and recombination proteins [BR:afo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     Afer_0983
Prokaryotic defense system [BR:afo02048]
 CRISPR-Cas system
  Universal Cas proteins
   Afer_0983
SSDB
Motif
Pfam: Cas_Cas1
Other DBs
NCBI-ProteinID: ACU53922
UniProt: C7LYW4
LinkDB
Position
complement(1003642..1004586)
AA seq 314 aa
MTEGRVPLSGERVGIGELQPVSRRSSFVYLEHCVVHRDANAVVSVTESGTTYLPAAAVGT
LLLGPGTRITHQAMLLLGESGVVVCWVGEGDTRLYAWAPSLFQSTRFLEAQARLVSNRQD
RLRVARQMYQMRFPGEDVSKATMQRLRGMEGARIRRTYRHLASAFGIDWHGRHYDPNNSS
AGDDVNRALSIANSVLYGVVHTAIVALGCSPGLGFVHTGHSLSFVYDVADLYKVELAIPV
AFEAAAQRTGSLSSQVRRTMRERIHEAHLLERAVDDIRLLLGTPDADLGGEPGLVLFDDR
IGEVPAGTDYSSDV
NT seq 945 nt   +upstreamnt  +downstreamnt
atgactgaaggccgtgtcccactcagtggagagcgcgtcgggataggcgaactccagccg
gtctcacgacgatcctcgttcgtctacctcgagcactgcgtcgtccatcgggatgcgaat
gcagtcgtgtcggtaacagagtccggcacgacctacctgcctgcagcagcggtcggcacg
ctcctcctcggtcccggaacgcgcatcacccatcaagccatgctgctcctgggagaatcc
ggggtcgtggtgtgctgggtgggcgaaggtgatactcgtctgtacgcctgggcaccgtcg
ctgttccagtctacgcgcttcctcgaggcgcaagctcgtctcgtctcgaatcggcaagat
cgactccgggtcgcgcgccagatgtatcagatgcgctttcccggcgaggacgtgagcaag
gccactatgcagcggctccgaggcatggagggcgcgcgcatccgtcgcacgtatcgtcac
cttgccagcgcctttgggatcgactggcatggtcggcactacgaccccaacaactcgtcc
gcgggcgatgatgtcaatcgcgcgctctccatcgcgaacagcgtgctctacggcgtggtc
catacggcgatcgttgcactcggctgtagtcccggcctgggcttcgtccacactggccac
tcgctgtcgttcgtctacgacgtcgccgacctctacaaggtagaactggcgataccggtg
gccttcgaggcagccgcccagcgaacgggaagtctgtcgagtcaggtccgacgaacgatg
cgggaacggattcacgaggcacatctcctcgaacgagccgtcgacgacattcgtctcttg
cttggtacgccagatgccgaccttgggggcgaacccggtctcgttctcttcgacgatcgc
atcggcgaggtcccagcgggcaccgactacagctccgacgtatga

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