KEGG   Acidimicrobium ferrooxidans: Afer_0989
Entry
Afer_0989         CDS       T00956                                 
Name
(GenBank) CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
afo  Acidimicrobium ferrooxidans
Brite
KEGG Orthology (KO) [BR:afo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:afo02048]
    Afer_0989
Enzymes [BR:afo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Afer_0989
Prokaryotic defense system [BR:afo02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Afer_0989
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 Cas3_C DEAD AAA_16 Helicase_C ResIII KPP10_Orf10 AAA_30 DUF7533 AAA_35
Other DBs
NCBI-ProteinID: ACU53928
UniProt: C7LYX0
LinkDB
Position
complement(1009361..1012129)
AA seq 922 aa
MTHNDGALIEGQIPIPPAFWLWAKTSRAPTEPPTYRWHPLAAHLVDAALVAQQLWAGWLS
PSTKRWLGEPLGGEDHARALFALLAGCHDLGKATPAFQIQVDWLHPQLRDAGLAVDKPLP
QRSKAPHALASAATVQPLLAARGWSEPAIRGVAAILGGHHGWFPPLGYEREPIKRPELYG
LAGRPLGGAGDPWSAARERLFDLVVEVAGAQQVLGLAGTTELGSARRLALAGFVILADWI
ASNEQLFPYLCLPYDDAYLHAAQQRAAEALVQLGWHGVANLGAVVGAPAFEHRFGFSPNA
LQRQTLEAVEQGDGGLVLIEAPMGMGKTEAALAAAEVLATRQGHGGAFIGLPTQATSNQM
FHRTRRWLEQLGPGTFVLELAHGRAQQVPAFRDLLENGAPSAVDVDEGDIARVTAEAWFT
GPKRRLLAPFVVGTIDQILLGTAKVRHVALRHVGLAGKVVILDEVHAYDAYMSVFLRRVL
EWLGAERIPVILLSATLPPAVRARLIEAYAGHSTPLGLVGYPSITTVSTDGHVTTTPVAT
DASSVTVRLEHLDEDPEDESSMPLLEMVAQMAEAGANILVIRNTVARAQRTYRAVAERRP
MGTVHLLHARFTTADRLRKESWLAEHFGRGGTRLSGQVVVGTQVLEQSLDIDFDVLATDL
APVDLVLQRIGRVHRHRGTRRPVGFTEPRVIVTGFTRSPTGPPAFPSGSVRVYGEHLLLR
TAALLLARDSLTLPDDVPSLVAAVYGDDDVIAPAWHDHGARVAVEWQSEQHERERRAEQF
VISDPTRAGYLLELERIRLGDPEDDDDPRVQAAVRDSVPSIEVAIACVGPSPNIARFGTT
EVSLEHPPTPDDVEAVLGSVVRLPSYLTEAATSLAVPEGWRRHPWLRRQRVLVLGLDGEC
SLGYYRIRYTDVEGLEVVSGGA
NT seq 2769 nt   +upstreamnt  +downstreamnt
atgacccacaatgatggcgcactcatcgaaggccagattccgatcccgccagccttctgg
ctttgggccaagacctcgagagcacccacggagcctccgacctaccgctggcaccccctc
gcggcgcacctcgtcgacgccgccctcgttgcacagcagctgtgggccgggtggctctca
ccatcgacgaagcgctggctcggcgaacccctcggcggtgaggaccacgctcgagcattg
tttgccctcctcgccgggtgtcacgacctcggcaaggccacacccgctttccaaatccag
gtcgactggctgcacccgcaactccgcgacgccggcctcgccgtggacaagccgctcccc
cagcgctcgaaggcacctcacgcactcgcctcggcggccacggtgcagccgctgctcgca
gctcgcggctggagcgaacccgctatccgcggagttgcagcgatcctcggtggtcaccac
ggttggttccctcctctgggctatgagcgagaaccgatcaagcgccccgaactctatggt
ctggcgggacgacctctcggcggtgccggagacccctggagtgccgcgcgcgagcgcctg
ttcgacctcgtcgtcgaggtcgccggtgcgcagcaggtactcggcctcgcaggcacaacc
gaactcggcagtgcgcggcgactcgcactcgcagggttcgtcatcctcgcggactggatc
gcgagcaacgagcagctcttcccctacctctgcctcccctatgacgacgcctacctccac
gcagctcagcagcgcgccgccgaggcgctcgtgcaactcggatggcacggagtcgccaac
ctcggagccgtggtcggcgcgcccgccttcgagcatcgtttcggcttctcgccgaacgcc
ctacagcgccagacgctcgaggccgtcgagcaaggcgacgggggcctagttcttatcgag
gcgccgatgggcatgggtaagaccgaagccgccctcgctgcggccgaggtcttggccact
cgccaaggtcacggcggagccttcatcggcctgccaacacaagccacgagcaaccagatg
ttccaccgcaccaggcgctggttggagcagcttgggcccggcacctttgtgctcgaactt
gcccacggccgcgcacagcaggtgccagcgttccgtgacctccttgagaacggcgctccg
tccgcggtcgatgtcgacgaaggcgacatcgcacgcgtcacggccgaagcatggttcacc
ggtcccaaacgccgcctgctcgcccccttcgtcgtgggcacgatcgatcagatcctgctc
ggaaccgccaaggtccgccacgtggccttgcgacacgtcggtctcgccggaaaagtggtc
atcctcgacgaggtccatgcctacgacgcctacatgtcggtcttcctccgccgtgtcctc
gagtggctcggcgcggagcggattccggtgattctcctctccgcaacgctccctcctgcc
gtgcgcgcacgtctcatcgaggcgtatgcgggacactcgacaccactcgggctcgtgggc
tatccctcgatcacaactgtctcgaccgacggccacgtcaccacgactccagttgctacg
gacgcatcatcggttacggtgcgcctcgagcaccttgacgaggaccctgaggacgaatcc
tcgatgccgctactggagatggtcgcccaaatggcagaggccggggcgaacatcctcgtc
atccgcaacaccgtggcaagggcgcaacgcacctaccgcgccgtcgctgagcggcgaccc
atgggcacagtacacctgctgcacgctcgattcaccacagctgatcgactgaggaaggag
tcctggctcgcggagcacttcggccgcggtggcacacgcctctcagggcaggttgtcgtt
ggcacacaggtgctcgaacaatcgctcgacatcgatttcgacgtactcgcgaccgacctc
gcgccggtcgacctcgtcctccagcgaatcggcagggtccatcgccaccgcggcacgcga
cgccccgtcggcttcacagagcctcgtgtcatcgtgacagggttcacgcgctcgccaacc
ggaccacccgcgtttccttcgggctcggtgcgagtgtacggagagcacctgttgcttcga
acggccgccctgctgctcgctcgggactcgctgacgctccccgatgacgtcccctccctg
gtggcggccgtctatggggacgacgacgtcatcgctccagcctggcatgatcatggcgct
cgggtcgccgtcgaatggcaatcggagcaacacgaacgagaacgacgggcggagcagttc
gtcatctcggacccgacgagggcggggtatctcctggaacttgaacgtatccgtcttggc
gaccctgaagacgacgatgatcctcgtgtccaagcggcggtgcgcgacagcgtcccgagc
atcgaggttgcgatcgcgtgtgtcggcccctcgccgaacatcgcgcgcttcgggacgacc
gaggtcagtctcgagcatcctccgacgcccgatgacgtcgaggcggtcctcggctcggtg
gtccggctgcctagttacctcacggaagctgcaaccagtctcgccgtgccggagggttgg
cgtcgtcacccctggctacggcgtcagcgggtgctcgtgttgggacttgacggtgaatgc
tcgctcgggtattatcgcattcgatatactgacgtagagggattggaggtggtgagcggt
ggagcctga

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