KEGG   Acidimicrobium ferrooxidans: Afer_1025
Entry
Afer_1025         CDS       T00956                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
afo  Acidimicrobium ferrooxidans
Pathway
afo00230  Purine metabolism
afo00240  Pyrimidine metabolism
afo01100  Metabolic pathways
afo01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:afo00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    Afer_1025
   00240 Pyrimidine metabolism
    Afer_1025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afo03400]
    Afer_1025
Enzymes [BR:afo01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     Afer_1025
DNA repair and recombination proteins [BR:afo03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    Afer_1025
SSDB
Motif
Pfam: Ribonuc_red_lgC LAGLIDADG_3 Ribonuc_red_2_N Intein_splicing Ribonuc_red_lgN DUF4094
Other DBs
NCBI-ProteinID: ACU53963
UniProt: C7LZ05
LinkDB
Position
1053128..1057123
AA seq 1331 aa
MARSTSARIQRHFTAPGLHPYETVGWERRDARITNWRTGDVAFEQRDVEVPVTWSQNATN
ILAQKYFRGHLGTPEREGSLRQVVDRIVNRIVAWGEADGYFADDDERDAFADELRWLLVH
QRAAFNSPVWFNIGVEGVPQQASACFILSVDDTMESILNWYHEEGIIFKGGSGAGVNLST
IRSSVEPLAGGGTASGPVSFMRGADASAGTIKSGGKTRRAAKMVILNVDHPDVEEFVWTK
AIEERKARVLAEAGFDMGVDGKDAFSIQYQNANNSVRVTDEFMQAVVEDREWELRAVTTG
EVTKTVRARDLFHQIAEAAWECADPGLQFDTTINRWHTTPNAGRINGSNPCFPGSARVHT
NKGLIAFEELTRRVLDGEEFLVYTHDSTSPDDPTEQVLLSSPEAFMVTGYNQVVKLRFDN
GAELRCTPGHRIFTVNRGYVAAEDLTPEDEVQLLDLPAPATDASWVLPVATDPEFYHHKG
DRRDPMTFPERWSEDFAHFLGWLIGDGSLSNGTVVATYGSPDDQQEILPIHQQLLLEING
NRPLKVSTQANGTVQLRFGRQRFMRFLEALGMKRAKGPDKDVPWAIEQAPAEIVGAFLRG
LFDADGTVIVDRNKGSYVSLGSISTGLLRSVQRLLTTFGITSRIYKTRSGSSNGSFSYTG
RDGDVRVYPNHDAYQLRITSASIVRFAEHVGFGLGAKQARLRDIVGGQQSYEVRRTARLT
ERLEDGIELTYNLSEPKNHSYIVDGIVVRNCSEYMHLDNSSCNLASINLLAYLDEDGNFD
VEGFRHTARVLITAQDILAGNADYPTPRIAETSRAYRQLGLGYANLGAMLMALGLPYDSD
GGRAYAAAVTALMTGAAYERSAELAERLGPFAGYADDAESMLRVLGMHRDALAKVDGAPE
AIVEAARASWDMAIARASEVGVRNAQASLLAPTGTIGFLMDCDTTGIEPDFSLVKYKTLV
GGGTMKIVNQTVPRALRTLGYPEHEIDQITAYLAEHDSIVGAPGLKPEHEAVFACAVGEY
PISPTGHLAMMGAVQPFLSGAISKTVNLPSTSTVEDVEQTYLDAWRLGIKAVALYRDGSK
VGQPLSTTHEEDSEAITSLKEQLSELERQLAASRTRPVRERLPRHRRSRTYAFQVADAEG
YVTVGEYDDGRPGEVFVKVSKQGSTLAGVMDAFSIAVSLGLQHGVPLETFVRKYVNMRFE
PAGMTDDPDVRIASSLVDYIFRRLAIDYLPREVREDLGVLTTAERRTELLFPVEEVSEPT
TRASAQTYSQAEHRLDSGRDDVVHETATRESGLHVSASASDAPYCFSCGNVMQRSGSCYV
CPACGTTSGCS
NT seq 3996 nt   +upstreamnt  +downstreamnt
gtggcaaggtccacgagtgcacggattcagcggcatttcacggctccggggctgcacccg
tacgagacggtgggatgggagcgtcgcgacgcgcggatcacgaactggcgtaccggcgac
gtcgcctttgagcaacgagacgtcgaggttcccgtgacgtggagccagaacgccacgaac
attctcgcgcagaagtacttccggggccatctcggcacaccggagcgggagggctcgttg
cgccaggtcgtcgatcggatcgtgaatcggatcgtggcctggggcgaggccgatggctac
ttcgccgacgacgacgagcgcgatgccttcgcggacgagttgcgctggctgctcgtccat
cagcgagcggcgttcaactcgccggtctggttcaacatcggggtcgagggcgtgccgcag
caggcgagcgcctgtttcatcctctccgtcgatgacacgatggagtccatcttgaactgg
taccacgaggaagggatcatcttcaagggtggttctggtgccggggtgaacctctccacc
atccgctcctcggtcgagccgttggcaggtggtggcaccgcttcggggccggtgagcttc
atgcgaggcgccgatgcctcagcgggcaccatcaagtcgggaggcaagacgcggcgggct
gccaagatggtcatcttgaacgtcgaccaccccgacgtcgaggagttcgtctggacgaag
gccatcgaggaacgcaaggcgcgcgtgctcgcagaagccggcttcgacatgggcgtcgac
ggcaaggatgcgttctcgatccagtaccagaacgccaacaactccgtgcgcgtgaccgat
gagttcatgcaggccgtcgtcgaagaccgggagtgggaactgcgggcggtgacgacgggc
gaggtcaccaagacggtgcgtgcccgtgacctcttccatcagatcgccgaggccgcctgg
gagtgcgctgatccagggctccagttcgacaccaccatcaatcgctggcataccacgccg
aatgccgggcggatcaacgggtcgaatccgtgcttcccgggctcggccagggtccacacc
aacaaaggcctcatcgccttcgaggagttgaccaggcgcgtgctcgatggcgaggagttc
ctggtctacacgcacgacagcacgagccctgacgatcctacggagcaggtgctgctctcc
tcgccagaggcgttcatggtcaccgggtacaaccaagtcgtcaagttgcgcttcgacaac
ggcgccgaacttcgctgcacaccgggacaccgcatcttcacggtcaatcgcggttacgtc
gcggccgaggacctcaccccggaggacgaggtgcagctgctggatcttccggcgccagcc
acggatgcatcctgggtgttgccggtggcaaccgatccggagttctaccatcacaagggc
gaccgccgcgacccgatgaccttcccagagcgctggagcgaggacttcgcccacttcttg
ggttggctcatcggagacgggtcgctctccaatgggacggtcgtggcgacctatgggtct
ccagacgaccagcaggagatcttgccgatccaccagcaactcctgctcgagatcaacggc
aacaggcctctgaaggtgtcgacccaagccaacggcaccgtccagctgcgctttggcagg
caacggttcatgcggttcttggaagcgctcggcatgaagagggcgaagggaccggacaag
gatgtgccgtgggcgatcgagcaggctccagcggagatcgtcggcgcctttcttcgaggc
ttgttcgacgccgatggcacggtgatcgtcgaccgcaacaaggggtcctacgtttccctt
ggctcgatctcgacgggcttgctccgctcggtgcagcgactgctgacgacgttcggcatc
acgagccggatctacaagacgcgttcggggtcgtcgaatgggtcgttctcgtacaccggg
cgtgatggggacgtgagggtgtacccgaaccacgatgcttatcagctacggatcacctcg
gcgtcgatcgtgcgcttcgccgagcacgtcgggttcggcctcggcgccaagcaggcgcgg
ctgcgcgacatcgtgggtggacagcagtcctacgaggttcggcggacggcgcggctgacg
gagcgtctcgaggacgggatcgagctcacctacaacctgagcgagcccaagaaccattcc
tacatcgtcgatgggattgtggtccggaactgctcggagtacatgcatctcgacaactcg
tcgtgcaatttggcttccatcaacctgcttgcctacctggacgaggacggcaacttcgac
gtcgaggggttccgtcacacggcgcgagtgctcatcacggcgcaagacatcctcgccggc
aacgccgactacccgacaccgaggatcgcggagacgtcgcgggcctatcggcaactcggg
ctcggctatgcgaatctcggggcgatgctgatggcgctcgggctcccatacgactcagac
ggcgggcgcgcctatgcggctgcggtgacggcgctcatgacaggagctgcgtacgagcgt
tctgcagagctcgccgagcgcctcggccccttcgctggatacgccgacgatgctgagtcc
atgctgcgggtgctcgggatgcatcgcgacgccttggcgaaggtcgatggcgctccggag
gcgatcgtcgaggccgctcgtgcttcgtgggacatggccatcgcgcgcgcgagcgaggtc
ggcgtccgtaatgcccaggcatcgctgctcgcgccgaccggcacgatcgggtttctcatg
gactgtgacaccaccggtatcgagccggacttctcactggtgaagtacaagaccctcgtc
ggtggcggcaccatgaagatcgtcaaccagaccgtgccacgggcgttgcggacactgggg
tatccggagcacgagatcgaccagatcacggcctatctcgccgagcacgactccatcgtc
ggtgcgcctgggctcaagccggagcacgaagccgtcttcgcatgcgctgtcggggaatac
ccgatcagcccgacgggacacctcgcgatgatgggggccgtgcagccgttcctctctggt
gcgatctcgaagacggtgaacctgccgagcacctccaccgttgaggacgtggagcagaca
tacctggatgcctggcggctcgggatcaaggcggtcgcgctctatcgcgacggatcgaag
gtcggtcagcccctttcgacgacccatgaggaggattctgaggccatcacgtcgctcaag
gaacagctgagcgagctcgaacgccagctcgcagcctcgcggacgcgccccgttcgggaa
cgcttgccgcgacaccggcggagccgtacctatgcgttccaggtcgctgacgccgagggc
tacgtgacggtcggggagtatgacgacggtcgtccgggcgaggtgttcgtcaaggtctcc
aagcaaggctcgacgctcgctggtgtgatggacgcgttctctatcgcagtgtcgctcggg
ctccagcacggcgtgcctctcgagacgttcgtgcgcaagtacgtcaacatgcgcttcgaa
ccggccggcatgaccgatgacccggatgtgcgcatcgcctcgagcctcgtcgactacatc
ttccgccggctcgccatcgactatctgccgcgagaggtgcgcgaggacctgggggtgctg
acgacggcggagcggcgaacggagttgctgttcccagtcgaggaggtcagtgagccgaca
acgcgtgcgagtgcgcagacgtactctcaggctgagcatcgcttggactcgggtcgggat
gacgtcgtgcatgagactgcgactcgtgagagcgggctgcacgtctcggcgagcgcgtcg
gacgcaccgtactgcttctcgtgtggcaacgtcatgcagaggtctggctcgtgctacgtc
tgtcctgcgtgcgggacgacgagcggttgtagttag

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