Acidimicrobium ferrooxidans: Afer_1217
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Entry
Afer_1217 CDS
T00956
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
afo
Acidimicrobium ferrooxidans
Pathway
afo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Afer_1217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afo03400
]
Afer_1217
Enzymes [BR:
afo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Afer_1217
DNA repair and recombination proteins [BR:
afo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Afer_1217
RecFOR pathway proteins
Afer_1217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
Motif
Other DBs
NCBI-ProteinID:
ACU54148
UniProt:
C7LZJ0
LinkDB
All DBs
Position
complement(1274409..1274903)
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AA seq
164 aa
AA seq
DB search
MPEARLRILGVDPGLARLGYAVIEATGDTLRLVGAGLVTTAARACRASRLHEIAEGFESV
LDDFDPTEAAIERLAFTRNVSSALPVSEVVGVVRLALWRRGVVAYDISPNTVKNAATSGG
SAAKEQVQRTVVRLLGLDEPPQPPDVADAMAIAYTRLAQRRWER
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaggcgaggctacgcatcctcggcgtcgatccgggtctcgcacgcctggggtat
gcggtgatcgaggcgaccggagataccctacgtctcgtgggcgcgggtctcgtgacgacg
gcggcacgggcatgccgtgccagtcggttgcacgagatcgccgaggggttcgagagcgtg
ctcgacgatttcgatccgacggaggcggcgatcgagcgtcttgccttcacgcgcaacgtc
tcctcggcgctcccggtgtccgaggtcgtcggggtcgttcgtctcgcgctctggcggcgt
ggggtggtggcctacgacatctccccgaacacggtcaagaacgcggcgaccagcggcggg
tcggcggccaaggagcaggttcagcggaccgtcgtgcggctcctcggtctcgacgagccg
ccgcagccgcccgatgtcgccgacgccatggcgatcgcctatacgcggctcgcgcagcgg
cggtgggagcgatga
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