Acidimicrobium ferrooxidans: Afer_1383
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Entry
Afer_1383 CDS
T00956
Name
(GenBank) ABC transporter related
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
afo
Acidimicrobium ferrooxidans
Pathway
afo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
afo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Afer_1383
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afo02000
]
Afer_1383
Transporters [BR:
afo02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Afer_1383
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
AAA_16
CysA_C_terminal
SMC_N
AAA_22
nSTAND_NTPase5
SRP54
AAA_30
AAA_33
AAA_25
AAA_29
AAA_28
NACHT
nSTAND3
ORC-CDC6-like
Rad17
AAA_18
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ACU54309
UniProt:
C7M001
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All DBs
Position
1437175..1438281
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AA seq
368 aa
AA seq
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MDVLEPVTDTRTTVARSHGVEVRLEGLVRAFGPTRALDDVSITVNPGELVALLGPSGSGK
TTALRVLAGLERPDQGRVVIDGEDVTRVSAHRRGIGMVFQAYSLFPTMTALENVAFGLRL
RRMRRPARTARAHELLELVGLGQLADRRPHQLSGGQAQRVALARALAIEPRVLLLDEPLS
ALDAAVRVRLREEIRRIQLELGTTTVFVTHDQEEALSIADRVAVLRAGRLEQLDTPTQIY
HRPATPFVASFIGRANRIPAQMTENGRLLVLGHEIDAPTADLAPGTRHVALMRPESLTIT
PAPDGTGRILGLVFRGASTDVTVAWPTLPDPLVVTLAGEPTADLAPGARVEVVPRGTVLF
VERAEERP
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggacgttctcgaacccgttaccgacacccgcacgaccgtcgcgcgatcacacggcgtc
gaggtacgcctcgagggcctcgtgcgcgcgttcggtccgacacgggcgctcgacgacgtc
tcgatcaccgtcaaccccggcgaactcgtcgccctcctcggcccgtcgggaagcgggaag
accaccgcactcagagtcctcgccggcctcgagcgccccgaccaggggagggtcgtcatc
gacggcgaggacgtcactcgcgtgagcgcccatcgacgcggcatcggcatggtgttccag
gcctacagcctcttccccaccatgaccgccctcgagaacgtcgccttcggcctccgcctc
cgcaggatgcgtcgccccgcccgcacggctcgcgcacacgagctcctcgagctcgtcggg
ctcggccaactcgccgatcgtcgaccccaccagctctcggggggtcaagcccaacgggtc
gcgctcgctcgcgcactcgcgatcgagccccgcgtcctgctcctcgacgaaccgctgagc
gcgctcgatgccgccgtgcgtgtgcgcctgcgcgaggagatccgtcgcattcagctcgaa
ctcggcaccacgaccgtcttcgtcacgcacgaccaagaggaagccctcagcatcgccgac
cgagtcgcggtgctgagggcgggccgactcgagcagctcgacaccccgacacagatctac
catcggccggcgacgcccttcgtcgcgtccttcatcggccgagccaatcgcatcccggcc
cagatgaccgagaacgggcggctcctcgtgctcggacacgagatcgacgcgcctaccgcc
gacctcgcccccggcacccggcacgtcgcactcatgcggcccgaatcgctcaccatcaca
cccgcaccggacggtacgggccgcatcctcggcctcgtgttccgaggtgcaagcaccgac
gtcaccgtggcgtggccgacgctgcccgatccgctcgtcgtgaccctcgctggcgagcca
accgccgacctcgcccccggcgcccgcgtcgaggtcgtcccccgcggcacggtgctcttc
gtcgagcgtgccgaggagcgtccatga
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