Acidimicrobium ferrooxidans: Afer_1520
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Entry
Afer_1520 CDS
T00956
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
afo
Acidimicrobium ferrooxidans
Pathway
afo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
afo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Afer_1520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afo02000
]
Afer_1520
Transporters [BR:
afo02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Afer_1520
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
UBA_4
Motif
Other DBs
NCBI-ProteinID:
ACU54443
UniProt:
C7M0D5
LinkDB
All DBs
Position
1586019..1587851
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AA seq
610 aa
AA seq
DB search
MVQRRRSRVLTVLAGAALLAACGSTAQSGSSSTSSSSAANGIITFAEQPGASPNWIFWLT
PGSDFTVANNDQFQYLLWRPLYVFGNGAKAEINYALSIGNAPVYSDHDRVVTITLKHWMF
SDGQPITARSVVFWMNLLKANKADWGGYVPGQFPDNVASVTAVNASTVRFDLTGSFNPTW
FTYNELSQVVPLPMAWDRTSLGAPAPTASTPNLPDTTTQGAQAVYSFLAGQSKDLATYAS
SPIWSIVDGPWRLKAFTTDGQATFVPNPAYSGPIKPTAKEFIELPFTSDSAEYNVLASGQ
GQISYGYIPSTDVEQTAHITQLGYHVSPWTVFGFNYIPMNYHNPTYGAVFGQLYFRQALE
HLIDEPAWISTFLHGDGTPTYSPVPVSPANPFIDTTTRRPAYPYSPAAARSLLESHGWRL
VNGIMTCESPGTAANECGNGVAKGTSLSSVSLAYASGVPSLAQEMEAFASAAHSIGVNIV
LSSKPFDTLLGGLGACSPSQALCSWQMVNWGGGWTYGPDYLPTGGEFYLPGAGANPESFA
DPTATSLIDATHTATNLTPALDAYQNYIAKTLPVLYQPFPAYQVSAISTSLHGVVQNPYG
ILYPEEWRQS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtggttcagcgacgtcgaagtcgggtcctgaccgtactggcaggcgcagccctgttggcg
gcgtgcggcagcactgcccagagcggttcatcgagcacgtcgagttcgtccgccgcgaac
ggcatcatcaccttcgccgaacaacccggtgcgagcccgaactggatcttctggctcacg
cccggatccgacttcaccgttgcgaacaacgatcagttccagtatctgctgtggcgtccg
ctctacgtgttcggcaatggagcaaaggccgagatcaactacgcgctgtccatcgggaat
gcgccggtgtactccgatcacgaccgcgtcgtcacgatcacgctcaagcattggatgttc
tccgacggccagcccatcaccgcacgaagcgtggtcttctggatgaatctcctcaaggcc
aacaaggccgactggggcggctacgtacctggtcagttccccgacaacgtcgcatccgtc
accgcggtcaacgcatcgacggtccgcttcgacctcaccggctcgttcaatccgacctgg
ttcacctacaacgaactcagccaggtcgttccgcttccgatggcgtgggaccgcacctcg
ctcggcgccccagccccgaccgcctcgaccccgaacctccccgacaccacgacccaaggc
gcccaagcggtctactcgttcctcgccggccagtcgaaggatctcgccacgtacgcatcg
agcccgatctggtcgatcgtcgacggcccttggcgcttgaaggccttcaccacggacggt
caagcgaccttcgtccccaatccggcctactcggggccgatcaagccgaccgcgaaggag
ttcatcgagctgccgttcacctccgacagcgccgagtacaacgtcctcgcgagcggccaa
gggcagatcagctacggctacatcccgagtaccgacgtcgagcagaccgcgcacatcacc
cagctcggctaccacgtctcgccctggacggtgttcggcttcaactacatcccgatgaac
taccacaacccgacctacggcgctgtcttcgggcagctgtacttccgccaagcgctcgaa
cacctcatcgacgaaccagcgtggatctcgaccttcctccacggtgacggaacgccgacc
tacagcccagtgccggtcagccccgccaatccgttcatcgataccacgacccgccgtccg
gcctacccatattcgccggctgcggcacgctcccttctcgagtcccacgggtggcggctc
gtcaacggcatcatgacgtgcgagtcgcccggcaccgctgccaacgagtgcggcaacggc
gtcgccaaggggacgagcctctcgtcggtttcgctcgcctacgcgagcggcgtgccatcg
ctcgcccaggagatggaggcgttcgcctccgcagcccacagcatcggcgtcaacatcgtg
ctgtcctcgaagcccttcgacaccctcctcggaggactcggtgcatgctcaccctcgcaa
gcactgtgctcatggcagatggtgaactggggcggcggctggacgtacggtccggactac
ctgcccacgggcggcgagttctacctgccaggagcaggagccaacccggagagcttcgca
gaccccaccgcgacctcgctcatcgacgccacccacaccgccacgaacctcaccccggcc
cttgatgcctaccagaactacatcgccaagaccctgccggtgctctaccagcccttcccg
gcctaccaagtctcggcgatctcgacgtcgctccacggcgtcgtccagaacccgtacggg
atcttgtatccggaggagtggcgccagtcctaa
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