Acidimicrobium ferrooxidans: Afer_1938
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Entry
Afer_1938 CDS
T00956
Name
(GenBank) SMC domain protein
Organism
afo
Acidimicrobium ferrooxidans
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_27
AAA_29
HTH_24
ABC_tran
AAA_15
DUF1664
MarR
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ACU54842
UniProt:
C7M1U5
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All DBs
Position
2027871..2030711
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AA seq
946 aa
AA seq
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MMRLVRLRIGEARHLRGLELTLRSPGLTIIHGPNEAGKSTIVACLRLLLATPSTSRHREV
QALAGPSGGVEVGAVFALDDTTVELTKRWLTRPLTQLVIAGAGQLDGREAETRFAELLTT
AGLGEGAGDPLVSTLIDNGAGTTHLAASRIVAEALERRSGEEALVDPGLLARARTELARY
ETPGRSQPTGDLRQARDELDRTEAAYLVATADVNAVAEARRDLETIAEQLATLPDDEARL
KAEQDERLRRRAELEGLDVEVERSSRRVADLSDAIARELEALERQRELASALARSRERIE
QLDRDLEERREQLTRVQAQLGASHDGLDQARRELGELRETQARAREREALASVAAGAERL
SAQVARAVELRNRVAALEIAPPRRLDDALVASLQEAEARLLATRTVFETVGPSLTIRSER
SVEVVVNGDLQRLEPAHAMVRPIDERIIVSLGDVTMEISPGSAVSELEELAAERTRLLAS
LGVASLDEARALLEKAAQYDHELDQLRRELANLAPDGIEPLDDEATRARAAASRLDDAPE
LAPSDELERRVRALSDHVEALEAAAEEAQVAERRYHEDLEQLVGAREREALQLEQAERDL
AAEPAESDRVARIEDLERELETERHRHRELTDAIETRNHLDEELEVLATELGGLSNRRAE
LTTQRRLLEERLERATGLADRVVNLEERLEGLRRRVAVLEGQRAAARRLVEVLEEEQRRA
RERTEAPYRQLVERILTATLGERVEVILDEHLGVESLRRPTSSRTALATTPIAALSAGTR
EQVELACRFAATQLTGAVPIVLDDALGYSDTTRTRMLVAQLTALATDAQAIVLTAHPERY
LGASDAERIDLARSTESSSDTARGTSPPPTGAASEASLEDAVRSVLGDAGGPLNRNDIAS
RLDADPDAVARAIRTLRDAGVIEQIGQRRGARYRLCERDRTDPHAT
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtctcgtccgcctccgtatcggcgaggcccgccacctccggggcctcgagctc
acgttgcgaagtccggggctcaccatcatccacggccccaacgaggcggggaagtcgacc
atcgtcgcgtgcctgcggctgctgctcgcgaccccctccacgtcacgtcaccgcgaggtg
caagcgctggccggcccgtctggcggggtcgaggttggtgccgtctttgcgctcgacgac
accacggtcgagctcacgaagcgctggctcacccgacctctcacacagctcgtcatcgcc
ggcgcaggacagctcgatggacgagaagccgagacgcgcttcgccgaattgctgacgact
gcgggacttggcgagggtgctggcgatccgctcgtgagcaccctcatcgacaacggagcg
ggaactacgcacctcgccgcgagcaggatcgtggccgaagccctggagcgacgaagtggc
gaggaggccttggtcgatcccgggctgcttgcccgggctcgcaccgagcttgcccgctac
gagacgcccggacgctcccagccaaccggggacctccgccaagcccgcgacgaactcgac
cgcaccgaggccgcctacctggttgccaccgcagacgtcaacgccgtggctgaggcgcgc
cgggacctcgagacgatcgccgagcagctggcgacactccccgacgacgaggctcgcctc
aaggccgaacaggacgaacgtctccgacgccgcgcggagctcgagggcctcgacgtcgag
gtcgagcgatcgtcgcgccgagtcgccgacctctccgatgcgatcgcgcgagagctcgag
gccctcgaacgtcagcgtgaactcgcgagcgcgctcgcacgctcgcgagaacgcatcgaa
cagctcgatcgcgacctcgaggagcggcgcgagcagctcacgcgggtgcaggcgcaactc
ggtgcttcgcacgacggcctcgaccaagctcgacgtgagctcggtgagctccgcgagacc
caggcgcgcgccagggagcgcgaagcgctggccagcgtcgctgcaggcgccgaacgtctg
agcgcccaggttgcgagagcagtggagctccgcaatcgcgtcgccgccctcgagatcgct
ccaccgcgcaggctcgatgacgcactggtggcgagcctccaggaggccgaggccaggctc
ttggccacgcgaaccgtcttcgagaccgtcggacccagcctcaccatcaggagcgagcgg
tcggtcgaggtcgtcgtgaacggggacctccaacggctcgagccggcccacgcgatggtg
cgaccgatcgacgagcgtatcatcgtgtcgctcggggacgtcaccatggagatctcgccc
ggctcggcggtcagcgaactcgaggagctcgccgccgaacgcacccgactcctcgcaagt
ctcggtgtcgcgagcctcgacgaggcgcgcgccctcctcgagaaggctgcccagtacgac
cacgaactggaccagctgcgacgcgagctcgcgaacctcgctcccgacggcatcgagccc
ctcgacgacgaggcgactcgcgcccgtgctgcagcctcgagactcgacgacgcccccgag
ctcgcacccagcgacgagctcgagcgacgagtcagggccctgagcgatcacgtcgaggcg
ctcgaggccgctgcggaggaggcacaagtcgccgaacgccggtaccacgaggacctcgaa
cagctcgtcggcgcacgcgagcgtgaggccctgcaactcgaacaagcagagcgcgacctt
gccgcagagccagccgagagcgatcgcgtcgcgcgcatcgaggacctcgagcgcgaactc
gagacggagcgccatcggcaccgcgaactcaccgacgccatcgagacccggaaccatctc
gacgaggagctggaagtcctcgccaccgagcttgggggcctctcgaaccgaagagccgag
ctcaccacccaacgacgcctcctcgaggagcgcctcgagcgcgccacaggactcgccgac
cgcgtcgtcaacctcgaggagcgcctcgaagggcttcgtcgacgagtcgccgtgctcgag
ggccagcgcgcggccgcacgacggcttgtcgaggtcttggaggaagaacagcggcgtgcg
cgggagcgaaccgaagctccgtatcgacagctcgtggaacgcatcctcaccgccacgctc
ggcgagcgcgtggaggtgatcctcgacgaacacctcggcgtcgagagtctgcgacggccg
acgagctcgcggacggcgcttgcgacgacgccgatcgccgcgctgtcggcaggaacccgc
gagcaagtggagctcgcctgtcggttcgcagcgacccagctcactggcgccgtgcccatc
gtgctcgacgacgcgctcggctactcggataccacgaggacgcgcatgctcgtcgcacag
ctcaccgcactcgcgaccgacgcccaagccatcgtcctcacggcccaccccgaacgctac
ctcggtgcgagcgatgcggaacgcatcgatctcgcgcgtagcaccgagtcctcttcggac
accgcgcgtggcacgtcgccacctccgaccggagcggcctcagaggcgtcgctcgaggac
gcggtgcgctcagttctcggcgacgccggtggaccgctcaaccggaacgacatcgcatcc
cggctggatgcagacccagatgccgtcgcacgggccatccggacgctccgcgatgccggt
gtgatcgagcagatcggacaacggcgaggggcccgttaccgcttgtgcgagcgtgatcgg
acagacccgcacgccacctga
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