Aptenodytes forsteri (emperor penguin): 103893432
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Entry
103893432 CDS
T08527
Symbol
SKIV2L2
Name
(RefSeq) superkiller viralicidic activity 2-like 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103893432 (SKIV2L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afor03019
]
103893432 (SKIV2L2)
03041 Spliceosome [BR:
afor03041
]
103893432 (SKIV2L2)
03009 Ribosome biogenesis [BR:
afor03009
]
103893432 (SKIV2L2)
03016 Transfer RNA biogenesis [BR:
afor03016
]
103893432 (SKIV2L2)
Enzymes [BR:
afor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103893432 (SKIV2L2)
Messenger RNA biogenesis [BR:
afor03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
103893432 (SKIV2L2)
Spliceosome [BR:
afor03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
103893432 (SKIV2L2)
Complex C
U4/U6.U5 tri-SnRNP related factors
103893432 (SKIV2L2)
Ribosome biogenesis [BR:
afor03009
]
Eukaryotic type
Pre-60S particles
Helicases
103893432 (SKIV2L2)
Transfer RNA biogenesis [BR:
afor03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
103893432 (SKIV2L2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTR4_beta-barrel
DSHCT
DEAD
MTR4-like_stalk
Helicase_C
DEXQc_Suv3
ResIII
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
103893432
NCBI-ProteinID:
XP_009270831
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MAVFVGGVTRVVKRSEEKSSVAATGKPKREVEVDSTEDAVLGKKPKLEDVVSEDANLADL
MPQVKVQAVETVEGCTHEVALPADEDFTGLKPRTGKAAKEYPFILDAFQREAILCVDNNQ
SVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGD
VTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPD
NVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDEN
GDFREDNFNTAMQVLRDAGDLAKGDQKGRKGGTKGPSNVFKIVKMIMERNFQPVIIFSFS
KKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGIGIH
HGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTSASKFDGKDFRWISSG
EYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLLR
VEEINPEYMLEKSFYQFQHYRTIPEIVERVNNLEGQYNKIAIPNEENVVIYYKIRQQLAK
LGREIEEYVHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYV
VEVLLHCSKESLKNSATEAAKPARPDEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPIDN
RQSVLKSIQEVQKRFPDGVPLLDPIDDMGIKDQGLKKVIQKVEAFEHRMYSHPLHNDPNL
ETVYKLCEKKAQIAMDIKAAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGR
VACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQM
QECAKRIAKVSAEAKLEIDEENYLNSFRPNLMDVVYTWANGANFAHICKMTDVFEGSIIR
CMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggcggttttcgtgggtggagttacccgggttgtaaaacgatcggaggaaaaatcttca
gtagctgcgacagggaagcctaaaagagaagttgaggttgatagtaccgaagatgccgtt
ttgggaaagaagccaaaattggaagatgttgtatcagaagatgctaatctggcagacctg
atgcctcaagtaaaggtgcaagctgtggaaactgttgaaggttgtacacatgaggttgca
cttccagcagatgaagacttcacaggtctgaagccaagaactggaaaagctgcaaaagaa
tatccatttattcttgatgcctttcagagagaagctattctttgtgtagataataaccag
tctgtgttagtgtcggctcatacatcagctggtaaaactgtttgtgcagagtatgcaatt
gccctggctttgagggagaaacagcgtgtgatatttacgagtccaattaaagctttgagt
aatcagaagtaccgtgagatgtatgaagaatttcaggatgttggtttgatgactggggat
gtcaccattaatcctacagcttcttgtctggtaatgacaactgagattttgagaagtatg
ctctacagaggttctgaggttatgcgagaagtcgcatgggttatttttgatgaaattcac
tacatgagagattcagaacgtggtgtggtttgggaagagacaattattttgctccctgac
aatgttcattatgtgttcctttctgcaactattccaaatgcccgtcagtttgctgaatgg
atctgtcatcttcacaaacagccttgccatgtgatttacactgactatcgacctactcca
ctgcagcattatatattcccagcaggaggagatggactccatctggttgttgatgaaaat
ggagatttcagagaagacaattttaatacagcaatgcaagtgcttagagatgcaggagac
ttagcaaaaggggaccagaaaggcaggaaaggaggaacaaaaggtccctcaaatgttttt
aagattgtgaaaatgatcatggaaaggaatttccaacctgtgattattttcagcttcagt
aagaaagactgcgaagcctatgcacttcagatgacaaagttagatttcaatacagatgaa
gaaaaaaagatggttgaagaagtgttcaataatgcaattgattgtctgtcagatgaagac
aaaaagcttcctcaggttgagcatgtacttcctcttctgaagcgaggaattggtatccat
catggtggtctgcttcctatcttgaaagaaaccatagaaattcttttctctgagggccta
ataaaggccttatttgcaacagagacatttgctatgggaattaatatgccagccaggact
gtgctatttacaagtgccagcaaatttgatggaaaagatttccgatggatatcctcaggt
gaatacattcaaatgtcaggtcgtgcaggacgccgaggtatggatgacagaggaatagta
attcttatggtggatgaaaaaatgagtccaacaattggcaagcagcttttgaagggttca
gctgatcctttaaacagtgcattccacctgacgtacaacatggtattgaacttgcttcga
gtagaggaaataaaccctgaatacatgttagaaaaatccttctatcagttccaacattac
agaactattccagaaatagtagaaagagtgaataatttggaaggacagtacaacaaaata
gcaattcccaatgaagaaaatgtggtcatatactacaaaatccgacagcagctagcaaaa
ctgggcagagagattgaagaatatgttcacaaaccaaagtattgcttgccctttctacag
ccaggaagactggtaaaggtgaagaatgaaggtgatgactttggatggggagtggttgtt
aatttctctaagaaatcgaatgttaagccaaattctggtgaattggacccattatatgta
gttgaagtgctactgcactgcagcaaagagagtttgaaaaattctgctactgaggctgca
aagccagccaggcctgatgagaaaggagagatgcaggttgttcctgttttggtacatctt
ctctcagctatcagcagtgttcgactttacataccgaaagacctgaggcctattgacaac
aggcaaagtgtgttaaaatctatacaagaagtacagaaacgatttcccgatggagtaccg
ttactagaccctattgatgacatgggcatcaaagatcaaggactgaaaaaagtaatccaa
aaagttgaggcatttgagcataggatgtattcacatcctcttcacaatgatcccaacttg
gaaaccgtatacaaactttgtgaaaaaaaagcacagattgctatggatattaaagcagca
aagcgagaactgaaaaaagccagaactgtcttacaaatggatgaactcaaatgtcgcaag
cgtgttttgagaagactggggtttgccacgtcttcagatgttattgagatgaaaggacgg
gtcgcgtgtgaaatcagcagtgctgatgaactactcctgacagaaatgatgttcaatggt
cttttcaatgacttatctgcagaacaggcaactgcattactaagctgttttgtatttcaa
gagaattccagtgaaatgccaaaattgacagagcagttggcaggaccgcttcggcaaatg
caggagtgtgcaaaaagaatcgccaaggtgtcagcagaagcaaaactggaaattgatgaa
gaaaattacttaaattctttcagacccaacctaatggatgttgtctatacatgggcaaat
ggagctaactttgctcacatctgcaaaatgactgatgtctttgaaggtagcataattcgt
tgtatgagaaggctagaagaactgcttcggcagatgtgccaggctgcaaaagccattgga
aacacagagttggaaaataagtttgcagaggggattacaaaaatcaagagagatattgtg
tttgctgcaagcctttacctgtaa
DBGET
integrated database retrieval system
