Aptenodytes forsteri (emperor penguin): 103893448
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Entry
103893448 CDS
T08527
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03013
Nucleocytoplasmic transport
afor03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103893448 (CASC3)
03015 mRNA surveillance pathway
103893448 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afor03019
]
103893448 (CASC3)
Messenger RNA biogenesis [BR:
afor03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103893448 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
103893448
NCBI-ProteinID:
XP_009270886
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
RTFLSLSPQESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESAKVELKQDSNDSCESAAK
AEKGDEKPDSKGAVTGERQSGDGQESTEPVENKVGKKVPKHLDDDEDRKNPAYIPRKGLF
FEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDIRSAH
NPDDIKPRRMRKPRFGSPPQRDPNWSNERPNKPPRHQGADSTSAPPRTFTNRSSAGTGRM
PPPRNYPRMGGYKETRPSYRASEASVQHLSRNGEQAKQENNYRAKRAEQTPPRDKSPEVE
AAHVHGSPVKEEVALENQATAADAVQPPPDRPIEKKSYSRARRTRIKAGDAGKLADEVPA
SEGLTPVPPKPVQAETSPPPAKSSNWESPVESSLDGLEQEMTQMNLTEQNWTPGQSQFIQ
PRELRGIPNHMHVGTGPPPQFNRMEEMAVQGGRVKRYSSQRQRPPVPEPAPPMHISIMEG
HYYDPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPIANPGLYPPPVS
MPPGXPPPQQLLAPTYFSPPGVMNFGNPGSPYPPGALPPPPPPHLYSNTQAQSQVYGGVT
YYNTVQQQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERSNT
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
cgcaccttcctctccctctctccgcaggaaagcgaggatggcattgaaggagacgctgta
ctctcagattacgaaagcgcagaagactcggaggcagaggaagaggattacagcgaggaa
gaaagtgccaaagtggaactgaagcaggatagtaatgattcctgtgagtcagcagcaaaa
gcagagaaaggggatgagaaacctgactccaaaggtgctgtaactggtgagaggcaaagc
ggggatgggcaggagagcactgaacctgttgagaataaagttgggaaaaaagttcccaag
cacctggacgatgatgaggatcggaagaacccggcttacatcccgcgcaaagggctcttc
tttgagcacgacctccgagggcagacgcaggaggaggaggtcaggccgaagggtcgtcag
cggaagctgtggaaggatgagggccgctgggagcacgacaaattccgggaggacgagcag
gcccccaagaccaggcaggagctgatcgcgctttatggctatgacatcaggtcagctcac
aaccccgatgacatcaagccgaggaggatgcgcaaaccaaggtttgggagtcctcctcag
cgagacccaaactggtccaacgagaggccaaacaagcccccaaggcaccaaggcgcagac
agcacttcagctcccccgcgaacgttcaccaacaggagctctgcaggtacagggaggatg
cccccgcctaggaactacccgaggatgggcggctacaaagagacccgtccaagctaccga
gcttcggaagcaagcgtccagcatctgtctcgtaacggcgagcaagcgaaacaggagaac
aactatcgagcaaagcgtgcagagcaaaccccaccgagagacaagtcacccgaggtggaa
gcggcacacgtccacggcagccctgtgaaggaggaggttgctttggaaaaccaagccacg
gctgctgatgctgtgcagccaccaccagacagaccaattgaaaagaagtcttattcccgg
gcaagaaggaccagaatcaaagctggggatgcggggaagctggcagatgaagtgcccgct
tcggaagggctgactcctgtgcctccaaaacccgtgcaagccgagacgtcccccccacca
gccaagagcagtaactgggagtcaccagtagaatccagcttggatggactcgagcaagag
atgacccaaatgaatctcactgagcagaactggactccggggcagtctcagttcatacag
ccccgggagctgaggggtattcctaaccatatgcacgtgggaactgggccaccgcctcag
tttaacaggatggaggaaatggcggtgcaggggggccgcgtgaaacgctactcgtcgcag
cggcagagaccgccggtgccggagcctgccccccccatgcacatcagcatcatggaaggg
cactactacgacccactacaattccagggaccaatctacacccacagtgagaacccggcc
ccgctgccgccccaagggatgatcgtacagccagaaatgcacctccctcatccaggttta
catccccaccagacgccagcccccatagcaaacccggggctgtaccctccgccagtctcc
atgcccccgggccnnccccccccgcagcagctgcttgcaccgacttacttctcccctcct
ggagtcatgaattttgggaatcctggctccccctaccccccgggagcactaccccctccg
ccccctcctcatctctattccaacacgcaggcccagtcccaggtgtacggaggggtcacg
tactacaacactgtccagcagcaagtgcagcccaagccttctccgcctcgaaggacgtcc
cagcctgtgaccatcaagccaccgcctcccgaggacagcaaaggtgaaaagtcaaaggag
aggagcaacacgtag
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