Aptenodytes forsteri (emperor penguin): 103893537
Help
Entry
103893537 CDS
T08527
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103893537 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afor03400
]
103893537 (MSH6)
DNA repair and recombination proteins [BR:
afor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103893537 (MSH6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
Motif
Other DBs
NCBI-GeneID:
103893537
NCBI-ProteinID:
XP_009270965
LinkDB
All DBs
Position
Unknown
AA seq
1035 aa
AA seq
DB search
MPKRAATVSLEAKSKLTSFAAPESFESQANACSGGISGFAVWEHEKLDWLQEGKKKDAHR
KRQGDPDYDPCTLYVPEDYLNKCTPGMRRWWQLKSQNFDAVIFYKVGKFYELYHMDAVTG
VNELGLIFMKGTWAHSGFPETAFGRFSDVLVQKGYKVARVEQTETPEMMETRYKSMAHPT
KFDKVVRREICRIITKGTQTYSVLDCDPSENHNKYLLCVKEKEDSSGQRVYGVCFVDTSV
GKFYVGQFSDDRHCSRFRTLVAHYTPVQVLYEKGNLSVDTQKILKGSLVSCIQEGLIAGS
QFWNASKTLKVLLEEGYFKEKQNPENGCSLPSVIKSLTSESDSLGLTPGENSELALSALG
GCVFYLKKCLIDQELLSLANFAEYVPVDIDTAKTRSSSSFFAKTDQRMVLDGVTLMNLEV
LQNGTNGTTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLDAVEDLLAVPDKM
SEVSEHLKKLPDLERLLSKIHSIGSPLKSQNHPDSRAIFYEEIKYSKKKIADFLSALEGF
KVMNEIVDVIEEIASDFKSKVLKQLVTRKAKNPGGRFPDLSAELQRWDTAFDHNQARKTG
VITPKAGFDPDYDKALQDIKAVEEDLHKYLDKQRKLLGFKSMLYWGAGKNRYQMEIPESA
ISRNLPEEYELKSTRKGYKRYWTKEIEKMLAAMVNAEERRDAALKDCMRRLFYNFDKNSK
DWQTAVECIAVLDVLMSFANYSQDGDGPLCRPVILLPVDSAPPFLELKNSRHPCITKTFF
GDDFIPNDIVIGSKDEDSSSEASCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAEVC
RLTPIDRVFTRLGASDRIMSGESTFFVELSETSSILQHATEHSLVLVDELGRGTATFDGT
AIASAVVKELAEKIKCRTLFSTHYHSLVEDYSHNVAVRLGHMACMVENESEDPSQETITF
LYKFIEGACPKSYGFNAARLANIPEEVIQKGHRKAQEFEKMTISLRIFRYLCLVVDGATR
DAHAVQKLTAMINHL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaagagcagcaacggtttctttagaagccaagtctaagctgacatcgtttgca
gcacctgaaagttttgaatctcaagcaaatgcttgcagcggaggcatcagtggcttcgca
gtatgggaacatgaaaagcttgattggctgcaggaagggaaaaagaaagatgcgcacagg
aaacggcagggtgaccctgattatgacccatgtactctatatgtacccgaggactatctc
aacaagtgtacgccaggaatgcggaggtggtggcagctgaagagtcaaaactttgatgct
gtgattttctacaaagttggaaaattctatgagttgtatcatatggatgcagtcactggc
gtaaatgagttgggcctgatcttcatgaaaggtacttgggcccattcaggttttccagaa
actgcgtttggcagattctctgatgttctagtgcagaaaggctacaaggtagcccgtgtt
gagcaaacagaaactcccgaaatgatggaaacgcgctacaagtcaatggcccacccaaca
aaatttgacaaggttgtacgccgagaaatatgcagaatcatcaccaaaggaactcagact
tacagtgttctggactgtgatccctctgagaaccataacaaataccttctgtgcgttaag
gaaaaagaagactcctctggacaacgtgtttatggggtctgctttgttgacacgtcggtg
gggaagttttacgtaggccagttctcagatgaccggcactgttcgaggtttaggacttta
gtagcgcattacactcctgtgcaggtactgtatgagaaggggaacctgtctgtggacaca
cagaagatactgaagggctcacttgtttcttgcattcaggaagggctgatcgctggttcc
cagttctggaatgcatcgaaaacactaaaagtccttcttgaagaaggctatttcaaggag
aaacagaaccctgaaaatggatgttctctgccctctgtaatcaaatctctgacttcagag
agcgactcgctgggattaactcctggtgaaaacagtgaattagctctgtcagctcttggg
ggatgtgtcttctatctcaaaaaatgtctgattgatcaggagctgttatcgctggcaaac
tttgcggagtatgtccctgtggatattgatactgcaaaaactaggagttcaagtagtttc
tttgccaaaactgaccagcggatggtgctggatggagtcaccctgatgaacttggaagtc
ctgcagaacggaaccaatggaaccacagaaggtactttgttggaaaggattgattcttgt
tgtacgccatttgggaagcggctcctcaaacagtggctctgcgctccgctttgtaatcct
aaatccatcaatgatcgtttagatgctgttgaggaccttctggcagtgccagataaaatg
tccgaagttagtgagcacctgaagaaacttcctgaccttgaaaggctgctcagcaaaatt
cacagtattggatcgccacttaaaagtcagaaccatcctgacagcagggccatcttttat
gaagaaatcaaatacagcaaaaaaaaaattgctgactttttgtctgcactggaagggttt
aaagtaatgaatgaaattgtcgatgtcatagaagaaattgccagtgacttcaaatctaaa
gtccttaagcagctagtcacccgcaaagccaaaaatccaggcggccgcttcccagacttg
agtgcagagcttcagagatgggatactgcttttgatcataaccaggctcgaaagacagga
gtgattactccaaaggcgggttttgaccccgattatgataaagcactacaggatattaaa
gctgtagaggaagatcttcacaagtacctggataagcaacgcaaactgcttggattcaaa
tccatgctgtactggggggcaggcaaaaaccggtaccaaatggaaataccggaaagtgca
atatcacgtaatttgcctgaggaatacgagttgaagtcaaccaggaagggatataaacgt
tactggaccaaggagatcgagaagatgctggctgcaatggttaatgctgaagagcgcaga
gatgcagcactaaaagactgtatgaggcgtttgttttacaacttcgataaaaatagcaaa
gactggcagacagctgtggaatgcatcgctgtgttagatgtcttgatgtcctttgctaac
tacagtcaagatggtgacggaccactgtgccgacctgtaattctactgcctgtggatagt
gctcctcccttcctggaacttaaaaattcacgccatccgtgcattacaaaaactttcttt
ggggatgattttattcctaatgacattgtgataggaagcaaagatgaagatagcagtagt
gaagcttcatgtgtgttagtaactggcccgaatatgggtggcaaatctacgctcatgaga
caggctggtctcctggttataatggctcaactgggatgctacgtacccgctgaagtctgc
aggcttacaccgatcgacagagtatttacgagacttggcgcctcagacagaattatgtca
ggcgaaagtaccttcttcgttgaattgagtgagacttccagcattctccagcatgcaaca
gagcattcccttgtgctcgtggatgaactgggcagaggcacagctacttttgacggaaca
gctatagcgagtgcagttgtgaaagaacttgcggagaaaatcaagtgtcggaccctgttc
tccacccactaccactcgctggtagaggactattcgcacaatgtggctgtgcggcttggt
cacatggcatgtatggttgaaaatgagagtgaggatccaagccaggaaacaattacattc
ctgtataagttcattgaaggagcatgtccaaagagctacggcttcaatgcagcaagactt
gctaacattccagaggaagttattcagaaggggcacagaaaagcccaagagtttgaaaaa
atgaccatttcactgagaatatttaggtatctgtgcctggtggtggatggtgcaacacgc
gatgcacatgctgttcagaaacttactgctatgatcaatcatctttaa
DBGET
integrated database retrieval system
