Aptenodytes forsteri (emperor penguin): 103893862
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Entry
103893862 CDS
T08527
Symbol
PRPF40A
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103893862 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afor03041
]
103893862 (PRPF40A)
Spliceosome [BR:
afor03041
]
Complex A
U1 snRNP components
U1 related factors
103893862 (PRPF40A)
Complex B
103893862 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
103893862
NCBI-ProteinID:
XP_009271422
LinkDB
All DBs
Position
Unknown
AA seq
896 aa
AA seq
DB search
MGHPGMPHYPPMGMHPMGQRPPNMPPVPHGMMPQMMPPMGGPPMGQMPGMMQSVMPGMMM
SHMSQAAMQPTVPPGVNSMDAQVGVTPPGTQTTHPVVCAAQQTATTNSSVNEEHSKQKST
WTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTK
ESRWAKPKELEDLEAMIKAEENSAKPEESTPTTSAPAAAAEATNTTTTATTAAETAAAVT
TTTATSAATAASEAESAAASSVVENESTGTAAAEEQGQATSAPAVQEQSGETAANAADDS
SKQEASAEXVKLQSTTAFAKPVKKTXTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMI
INDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTR
YKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMA
NVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLR
ERRRQRKNRESFQLFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALDLFK
FYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIKLAFN
SLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEPAFED
ITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSESEDDDSHSK
KKRQRSESRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDTEREKDKKERERE
SEKDRARQRSESKHKSPTKKRPGKDSGNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgggacacccaggcatgccgcattatcctcccatgggaatgcaccctatgggtcagaga
ccaccaaacatgccgccagttccacacggtatgatgcctcagatgatgccccccatggga
ggaccaccaatggggcagatgcctggaatgatgcagtcagtaatgcctggaatgatgatg
tctcacatgtctcaagctgctatgcagcctacagttccgccaggggtgaacagcatggac
gcacaagtaggtgtaacacctcctggaactcagacaacacatcccgtagtttgtgcagcc
cagcaaactgccacaaccaacagttctgttaatgaagagcactctaaacagaaatctaca
tggacagaacacaaatcacctgatggaagaacatattactataatactgaaacaaagcag
tctacatgggagaagccagatgatctcaaaacacctgctgagcaattgttgtctaagtgt
ccctggaaagagtataaatctgattctggaaagccctactattataattcccaaacaaag
gaatcgcgctgggcaaaacccaaagagcttgaggatcttgaagcaatgattaaagctgaa
gaaaacagcgcaaagcccgaagaatcaactccaacaacatctgctccagctgctgcagca
gaagcaacaaacacaaccaccacagccacaactgctgctgaaactgccgcagctgttact
accaccactgctacttctgcagcaacagcagcttccgaagcagaatctgctgcagcttct
tctgtggtagaaaatgagagtactggcacggctgcagctgaggagcagggacaagcaact
tctgcccctgctgtgcaggaacagagtggagaaactgcagctaacgcagcagatgactct
tccaagcaggaggcctcagcagagtaagtgaaactacaaagcacaactgcatttgccaaa
ccagttaaaaaaacataaacatggaatacaaaggaagaagcaaagcaagcatttaaagaa
ctcttaaaagaaaagcgagtaccatccaatgcttcttgggagcaagctatgaaaatgatc
attaatgatcctagatacagtgctttggcaaaattaagtgaaaaaaagcaagcctttaat
gcttacaaagttcaaacggaaaaagaagagaaagaagaagcaagatcaaaatacaaagaa
gctaaagaatccttccagcgctttcttgaaaaccatgaaaagatgacatccacaacaaga
tacaaaaaagctgaacaaatgtttggggagatggaagtctggaatgcgatatctgagcgt
gatcgtcttgaaatttatgaagatgtcttgttttttctgtctaagaaagagaaggaacaa
gccaaacagttacgaaagaggaattgggaagctttaaagaacatactagataacatggct
aatgtcacttactgtactacttggtcggaggctcagcagtatctgatggacaatcctacc
tttgcagaagatgaggagcttcagaacatggataaggaggatgcactgatctgttttgag
gaacatatcagggcattggaaaaagaggaggaagaagaaaaacagaaaagtttgcttaga
gaaagaaggcggcagcgtaaaaatagagaatcttttcagctatttttagatgaactgcac
gagcatggacaattacattcaatgtcctcttggatggagttgtacccaaccataagctct
gacatcagattcactaatatgcttggtcaacctggatcaacagcacttgatcttttcaag
ttttatgttgaagacttgaaagcacgttaccatgatgaaaagaagataataaaagatatc
ttaaaggataaaggatttgtggttgaagtgaatacttcttttgaagattttgttacggtc
atcagctcaactaaaagagctactactttagatgcaggaaatatcaagctggctttcaac
agtctgctagaaaaggcagaagcccgtgaaagagagagggaaaaagaagaagctcgcaaa
atgaagcggaaagagtctgccttcaagagtatgttgaagcaagctactcctccaattgaa
ttggacgctgtctgggaagatatcagagatagatttgtgaaggaaccagcgtttgaagac
atcactctggagtctgaaagaaaaagaatatttaaagatttcatgcatgtactagagcac
gagtgtcagcatcatcattcgaagaacaagaaacattctaaaaagtctaaaaaacatcac
aggaagcggtctcggtctcgttcgggctcagagtctgaggatgatgatagccattcaaag
aagaaaaggcagcgttcagaatctagatcagtttctgagcgttcttccagtgcagaatcc
gagagaagttacaagaagtcaaaaaaacacaagaaaaagagcaagaagagaagacacaag
tctgattcaccagaatcggatactgaacgagaaaaagacaaaaaggagagagagagagag
agcgaaaaggacagagctaggcaaagatctgaatcaaaacataaatctcctactaaaaaa
cgacctggaaaagattctgggaactgggatacttctggcagcgaactgagtgaaggggag
ttggaaaaacagaggaggactcttttggaacaactggatgaagatcaatga
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