Aptenodytes forsteri (emperor penguin): 103894526
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Entry
103894526 CDS
T08527
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
afor
Aptenodytes forsteri (emperor penguin)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
VWA_2
NDNF
FN3_Tor_3rd
DUF4998
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
103894526
NCBI-ProteinID:
XP_009272214
LinkDB
All DBs
Position
Unknown
AA seq
1471 aa
AA seq
DB search
MLIRTCFFFACLPVASHVWGRVGQGSGRLKLTVLSEDRLQMKWKETEGNINGYKVRVKPM
AGDSEQEVMLKTKTPKATVGGLSPTKEYTLQVYVLNGSQEALFAKRKFVIEELKNASQTR
NNRRNSGTVSGKNLTSLGNSAAEHSGVAEATPPPLNAVLTQPAKDRAEKKRQKGIQPKGS
GETTRNQPSVDASVTEATPTTTKSSQRTPANPEQESLGKEKPTKDSLRRGSQFQCDTSAM
TDIVLLVDGSWSIGRNNFKLIKEFLSNLISPFSIAQDKIRVGLSQYSSDPRTEWDLSAYS
TRDQVLEAVRNLRYKGGNTFTGLALTHVLEQNLKPDAGARLEAEKLVILLTDGKSQDDAN
LAAQTLKNLGIEIFAIGVKNADEAELKQVASEPLELTVYNVLDFPLLSSLVGKLTRVLCT
RIKEKSNKESAGSTVKDIPVNTGPQLSPTDLKISAVTSKSMHLTWSPPLRPPKKYRIVYY
PTKGGIPKEVILDGAVSSLRLSNLTSHTEYLVSVFPIYDTVVGDGLRGVTSTLPLSSPRS
LRVSERSHNSIRLSWKAAQGATQYLVLCSAAPDGAEDYTTEVKVAQPEVLLAGLSPSTEY
SVAVYAMYGEDVSDPASIQETTLALSPPRYLSFSELSHASVRVSWEAASPAVKAHRVTYV
SSRGSNTGEVEVPGTATSTVLRPLSSLTQYFISVRSMYDEGDSFPITGNVTTLKVPPPHA
LKVTELSGNSLRLQWEAVAASDVVVYQIKWSTVSGEKPQELSIAGNVATAVLPGLQKNTD
YKISIWAYYKDGARSDTVSVQHRTNSRSPPTKLFIDSETPTSLQVHWTPPDGRIQHYKIT
YNPVSDAAAQQTIMASGKSSSVTLQSLLPDRAYKVTVSAIHYTGESESTSTTGRTAPVLS
KFPSIRGFVPSKAEACPTISSTEGSVRGFDMMEAFGLVEKEYASLKGVAMEPFVFSGSRT
FTLFKDTQLTQRTSDVHLFAIPPEHTISILLRLLPETPKEPFAVWQVTDEDFQPLLGVNL
DPSKKSLTYFNHDYKADLQEVSFDQQEVKKIFYGSFHKVHVAVSHFRIKLYLDCKKIAEK
PINTVGSISTAGFIMLGKVTRTRGPRSGSASFQLQSLQIVCSSVGAEEDRCCDLPALRDE
ETCPTLAPACSCTSGRPGLPGPPGPPGSPGRRGPQGEQGEPGPKGEPGPPGQVGPEGPSG
QQGSPGSQGITVQGPVGPPGIKGEKGDTGSPGMQGIPGVQGAPGRDGLQGAKGVRGLEGT
AGPPGPPGPRGFQGVTGSQGSSGEKGPPGDVGPTGLPGPKGERGEKGEPQSLATIYQLVS
QACERMIQTHVLKFDSFIHEHARKPVPVWEERLKPGEPGPPGPPGPPGSNGERGENGIPG
QPGKDGYPGERGAPGPKGEKGMPGASEEGIQGPRGRTGPPGEVVLGKPGPKGYPGNAGPQ
GFPGVRGQPGQSGYPGGCDISGCYGAGRRER
NT seq
4416 nt
NT seq
+upstream
nt +downstream
nt
atgctgattcgcacttgtttcttttttgcctgcctgcctgtggcgagccatgtctgggga
cgagtgggccaagggtcaggccggctgaaactcactgtcctttcggaagacaggctccaa
atgaaatggaaagagactgaagggaacatcaatggctacaaagttcgggtaaagcctatg
gcaggggactcggagcaagaagtcatgctgaaaaccaagactcccaaagccacagtgggg
gggctgagccctaccaaggaatacacactgcaggtctacgtgctcaacggctcccaggaa
gccctgtttgccaagaggaaatttgtgatagaggaactcaaaaatgcatcccagactaga
aataacagaagaaactcaggaactgtgtcaggaaagaatctcacctctttggggaactca
gcagctgagcacagtggggtggcagaggccaccccaccacccctgaatgccgtcttgaca
cagccagcaaaggacagagctgaaaagaaaaggcagaaggggattcagccaaagggctca
ggagaaacgacaagaaaccagcccagtgtggacgccagcgtgacagaagcaacaccaaca
accacaaaatcatcccagcgcactcctgcaaacccggagcaagagtctctaggaaaagaa
aaacccacaaaggattcattgaggcgaggttcccagtttcagtgtgacacatctgcaatg
actgatatcgtcctgcttgtggatggatcctggagcatcggacgcaacaatttcaagctc
attaaggagtttctgagcaatttgatttccccattcagtattgcccaagacaagataaga
gtagggctgtcccagtacagcagcgatccccgcacagagtgggatctgagcgcttactct
acgagggaccaggtgctggaggctgtgaggaatttgcggtacaagggcggcaacaccttt
acaggtctggcgctgacccacgtcctggagcagaatctgaaaccagatgctggtgcccgg
ctggaggctgagaagttggtaatactcctgactgatggaaaatcccaggatgacgccaac
ctggctgctcagacattgaaaaacctgggcatagagatatttgccattggggtgaagaac
gcggacgaggcagagctgaagcaggtggcctcggagcctctggagctcacagtgtacaac
gtgctggatttcccattgctgagttctctggttggcaagctcacccgggtcctgtgcacc
aggatcaaagagaagagcaacaaggaaagcgcaggtagcactgtgaaagatatccctgtg
aacacgggtccccagctgagcccaactgaccttaaaatatcagctgtgacctctaagagc
atgcacttgacctggagtcctcctctgagaccaccaaagaaatatcggattgtgtattat
ccgactaagggtggtatccccaaagaggtcattttagatggagcagtctcctctctgcgt
ctttccaatttgacctcgcacacggagtatctggtgtcggtgtttcctatttacgacaca
gttgttggggatgggctgagaggcgtcacctccacattgcctttgtcttcccctcgctcc
ctgcgcgtctctgagcggagccacaacagtatcaggctgagctggaaggcagcccaggga
gccacgcagtacctggtgctgtgctccgcagcccccgacggagcagaggactatacgaca
gaggtgaaggtggcccagcctgaggtcctgctggctgggctgtcgcccagcacggagtac
tctgttgcggtgtacgcgatgtatggggaagatgtgagtgatccagccagcatccaggaa
accaccctggccttgagtcctcccagatacctgagcttctccgagctcagccacgcgtcc
gttcgagtcagctgggaggctgcgtctccggccgtgaaagctcaccgcgtcacctatgtt
tctagcagagggagcaacactggggaggtagaggttcctggcactgcaacatccactgtc
ctgaggcctttgtcctccctcacccaatacttcatcagtgtccgatctatgtatgatgaa
ggggactcctttccaattaccggcaacgttaccaccttaaaggtccccccgccgcatgca
ctgaaggtcaccgagctctctgggaacagcctccgactgcagtgggaagctgtcgctgcc
tccgacgtggttgtctatcagatcaaatggagcacagtcagtggagagaagcctcaggag
ctctccattgctggaaatgtggcaactgctgtcctgccaggcttgcagaagaacactgac
tataaaatatccatctgggcctattacaaagatggtgctcgaagtgacacggtttctgtt
cagcacaggaccaattcccggagcccacccaccaagcttttcatcgactctgagaccccc
accagcctccaggtccactggaccccccccgacggccgcatacagcactacaaaatcacc
tacaaccctgtttctgatgccgctgctcagcaaacaatcatggcttctggcaaaagcagc
agcgtgaccctgcagtcgctgctgcctgatcgagcctacaaggtgactgtttctgccatc
cactacacgggagagagtgagagcacatccacaacaggccggacggctcctgtgttgtct
aaattcccttcaatacgaggattcgttccatctaaagcagaggcctgccccaccatcagc
tctactgaaggctccgtacgagggtttgatatgatggaagcttttggcttagtagagaag
gaatacgcctcccttaaaggcgtagctatggagccatttgtattcagcggttcccgtacc
ttcaccctgttcaaagacactcagctcacccagaggaccagcgatgtccacctctttgca
atcccacccgagcacaccatcagcatcctcctgcgcctcctgcccgaaacccccaaggaa
cccttcgctgtgtggcaagtaacagacgaggacttccagccccttcttggtgttaacctt
gaccccagtaagaaatccttgacctatttcaatcacgactacaaggctgatttacaggaa
gtctcctttgaccagcaggaagtgaagaagatattctatgggagctttcataaggtgcac
gtggccgtgagccacttcaggatcaaactctatctggactgtaagaaaatagcagagaaa
cctatcaacaccgtcggcagcatctccacggctggcttcatcatgctgggaaaagtgaca
aggaccagaggaccgaggagtgggtctgcatcgttccagctgcagtctttgcagattgtg
tgcagcagcgtaggggcagaggaagacagatgctgtgatctccctgcactgagggacgag
gagacctgccctaccttagctcctgcctgctcttgtacttctggccgcccgggcttgcca
ggacctccagggccccctggcagccctgggaggagaggaccgcaaggggagcagggggag
ccaggacccaagggtgaacctggcccacctggacaagtagggccagagggtcctagtggc
cagcaaggctctccaggttcccaaggaatcacggttcagggtcctgtgggaccaccagga
attaaaggagagaaaggagacactggaagtcctggcatgcagggcattcctggtgtgcag
ggagctccaggcagggatggtcttcaaggtgcaaagggggtgaggggactagaaggcaca
gctgggcctccaggacctcctggaccaaggggtttccaaggagtgacaggctcccaaggc
agcagtggagagaagggacctccgggtgacgttgggccaacagggctgccgggtccaaaa
ggagaaagaggagagaaaggggaaccacagtccttggccacaatttaccagctcgttagc
caggcttgtgagcggatgattcagactcatgtgttgaaatttgactcattcattcacgaa
catgcaaggaagccagttcctgtttgggaagaaaggttaaaaccaggagaaccaggacca
ccaggtcctccaggtccccctgggagcaacggagaaagaggagaaaatggcatccctgga
cagcctggcaaagatgggtatcctggagaaagaggtgccccagggcccaagggagaaaaa
gggatgcctggagccagtgaggaagggatccaaggacccagaggcagaacaggcccacca
ggagaagttgtgctggggaaaccaggtccaaagggttaccctgggaatgctggtcctcaa
ggttttcccggtgtcagagggcagcctgggcagtctggatatccagggggctgtgatatc
tctggatgttatggggcaggtagaagagaacgctga
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integrated database retrieval system
