Aptenodytes forsteri (emperor penguin): 103895409
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Entry
103895409 CDS
T08527
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor04145
Phagosome
afor04148
Efferocytosis
afor04510
Focal adhesion
afor04512
ECM-receptor interaction
afor04810
Regulation of actin cytoskeleton
afor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103895409 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103895409 (ITGB5)
04148 Efferocytosis
103895409 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
103895409 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103895409 (ITGB5)
04810 Regulation of actin cytoskeleton
103895409 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afor04131
]
103895409 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afor04515
]
103895409 (ITGB5)
Membrane trafficking [BR:
afor04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
103895409 (ITGB5)
Cell adhesion molecules [BR:
afor04515
]
Integrins
Integrin beta subunits
103895409 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
EGF_2
I-EGF_1
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
103895409
NCBI-ProteinID:
XP_009273268
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MDLSLSMNDDLDNIRNLGTKLAEEMRKLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCI
GYKLFPSCVPSFGFRHLLSLTDKVDRFNEEVQKQKVSRNRDAPEGGFDAILQAAVCKEKI
GWRKEASHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYGASSQLDYPSLALLG
EKLAENNIHLIFAVTKSHYVLYKNFTALIPGTTVEILHKDSKNIIELIVKAYNSIRSKVE
LTVWDSPEDIGLTFTATCQDGLSYPGLRKCGDLKIGDTVSFEVAVEARSCPTEDTSHAFT
IKPAGFRDTLGVAGPYNCLWGCTGHAAPASGKCSGNGTYACGLCECDAGYLGARCECEEG
ASGDMHHAMCREAEGKPLCSGRGECSCNQCLCYESEFGNIYGPFCECDDFSCARYKGILC
SGHGECHCGECKCHAGYIGDNCNCSTETDGCVSSDGQMCSGRGTCVCGKCQCTEPGAFGE
TCEKCPTCPGVCSTKRDCIECKLFNSGRLADNQTCQKHCKDEIITTVDVLETEDPNAILC
AYPVNNCVMKFTYLELASGKSNLTVLKEPACSSAPSAVTIVLAVIGSVVLIGIILLGLWK
LLVTIHDRREFDRFQSERSRARYEMASNPLYRKPISTHNVEFTFNKLNKSYNGTVD
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggatctctccctgtccatgaatgacgacctagataatattcgcaatctggggaccaag
ctggctgaagagatgcgaaagctcactagcaatttccggctggggtttggatcttttgtg
gacaaaaacatttctcctttctcctacacggcaccaagataccaaaacaatccctgcatt
ggttacaagctgttccccagctgcgtcccatcctttggcttccgccacctcttgtcccta
acggataaagttgaccgtttcaacgaagaagttcagaaacagaaggtttcccgcaaccga
gatgctccagagggtggttttgatgcaattttgcaggctgctgtgtgcaaggagaagatc
ggctggcgtaaggaggcgtctcacctgctggtcttcacgacggatgatgtgccccacata
gccctggatgggaagctgggggggctggtgcagccccacgacggccagtgccacctgaat
gaagccaacgagtatggcgcgtccagccagctggattatccttccctggcgcttcttggg
gagaaacttgctgaaaacaacatccacctgatttttgctgttacaaaaagtcattacgtc
ctgtacaagaactttaccgccttgattcctgggacaacagtggagattttgcacaaagac
tccaagaatatcatcgagctgatcgtcaaggcctacaacagtattcggtccaaggtggag
ctcacagtctgggacagccctgaggacattggcttgaccttcactgccacgtgccaggac
ggtttgtcctatcccgggctcaggaagtgcggagatctcaaaataggagatacggtttcc
ttcgaggtggccgtggaggcgcggagctgccccaccgaggacacctcccatgccttcacc
atcaagcccgctggctttcgggacacgctgggggtggcggggccctacaactgcctctgg
gggtgcactggccatgctgcgccggccagcggcaagtgcagcggcaatgggacctacgcc
tgcgggctgtgcgagtgcgacgccggctacctgggggccaggtgtgagtgcgaggagggc
gccagcggggacatgcaccacgccatgtgccgggaggcggagggcaaacccctctgcagc
gggagaggggaatgcagctgcaaccagtgcctctgctacgagagcgagttcggaaacatc
tatgggcccttctgcgagtgcgatgacttctcctgtgccaggtacaagggaatcctctgc
tcaggccatggagagtgtcactgcggagagtgcaagtgccacgccggttacatcggggac
aactgcaactgctccactgagacggacggctgtgtttccagcgacgggcagatgtgcagc
ggcaggggcacctgcgtctgtgggaagtgtcagtgcactgagccgggggcttttggagag
acgtgtgagaagtgtcccacctgcccaggtgtctgtagcactaagagggactgcattgaa
tgcaagctgtttaactcaggaagactggctgataaccaaacctgccaaaagcactgcaag
gatgagatcatcaccactgtggatgttctcgaaacggaagacccgaatgcgatcctctgc
gcctacccagtgaacaactgtgtcatgaagttcacctacttggagcttgccagtgggaaa
tccaacctcaccgtcctcaaagagccagcgtgcagctcagcccccagcgctgtgacgatc
gtgctggcggtgatcggcagcgtggtgctgatcggcatcatcctgctggggctctggaag
ctgctcgtcaccattcatgacagacgggagtttgaccgattccagagcgaacgctcccgg
gccagatatgaaatggcatccaatcctctctaccgaaagcctatttccacgcataacgta
gagttcacgttcaacaagctcaacaagtcttacaacggtacagttgactga
DBGET
integrated database retrieval system