Aptenodytes forsteri (emperor penguin): 103895614
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Entry
103895614 CDS
T08527
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03040
Spliceosome
afor04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103895614 (PRPF19)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103895614 (PRPF19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afor03041
]
103895614 (PRPF19)
04121 Ubiquitin system [BR:
afor04121
]
103895614 (PRPF19)
03400 DNA repair and recombination proteins [BR:
afor03400
]
103895614 (PRPF19)
Enzymes [BR:
afor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103895614 (PRPF19)
Spliceosome [BR:
afor03041
]
Complex B
Other components
Prp19 complex
103895614 (PRPF19)
Complex C
Prp19-CDC5 complex
103895614 (PRPF19)
Ubiquitin system [BR:
afor04121
]
Ubiquitin ligases (E3)
U-box type E3
103895614 (PRPF19)
DNA repair and recombination proteins [BR:
afor03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
103895614 (PRPF19)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Prp19
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
DSE1_N
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_EIPR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
ASA1
CFAP251_N
PAC11
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_WDR41
PEP5_VPS11_N
NBCH_WD40
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_SPT8
PROPPIN
eIF2A
RMC1_N
Beta-prop_DCAF12
Beta-prop_ACSF4
TRM82_WD
Alpha_humulene_synt
DUF1830
CCDC13
ATG16
GP3
Cep57_MT_bd
ACR_tran
Motif
Other DBs
NCBI-GeneID:
103895614
NCBI-ProteinID:
XP_009273570
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MGAAQRTVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQ
HDAACRVIARLTKEVTAAREALATLKPQAGLIVPQTVPSSQPNVAGAGESMDLGELAGMT
PEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDL
CPSDTNKILTGGADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIR
IWSVPNASCVQVVRAHEGSVTGLSLHATGDYLLSSSDDQNSGGEPANEGGQSPPTLRISP
CVSAALTCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYL
ATAADDSSVKLWDLRKLKNFKTLQLDNNFEVCD
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgggagcggcgcaacgcacagtcgcccacccgatccggcccaagcctccctctgccacg
agcatcccggccatcctgaaagccctccaggacgagtgggatgccgtcatgctgcacagc
ttcaccctccgccagcagctgcagactacgcgccaggagctgtcccacgcgctctaccag
cacgacgccgcctgccgtgtcattgctcggctcaccaaggaggtcaccgccgccagagaa
gctttggcgactctgaagccacaggctggcctcatcgtgccccagacggtgccgtcctcc
cagccaaacgtggcgggagctggggagtccatggatctgggagagctcgcgggcatgacc
cccgagatcatccagaagcttcaagacaaggctacggtgctgaccacggagcgtaagaag
agaggcaagacggttccggaggagctggtgaagccggaggaactcagcaagtaccggcag
gtcgcctcgcacgtggggctgcacagcgccagcatcccggggatccttgccttggacctc
tgtccttccgacaccaacaagatcctcaccggcggggctgataaaaacgtcatcgtcttc
gacaagagctcggagcagatcctggcgacgctcaaggggcactccaagaaggttaccagt
gtcgtcttccacccctctcaggatttggtgttctcagcttctcccgacgctactatccgg
atctggtctgtgcccaacgcctcgtgcgtgcaggtcgtccgtgcccacgagggctctgtg
acggggctgagcctccacgcgacaggcgactacctcctcagctcttctgatgaccagaac
tctgggggggagcctgctaacgaaggcggacagtctcccccaaccctccgaatctccccc
tgtgtctctgcagctctcacctgcgcccagttccacccggacgggctcattttcggaacg
gggacgatggactctcagatcaagatctgggatctgaaggaacgcaccaacgtggccaac
ttcccggggcactcgggccccatcaccagcatcgccttctccgagaacggctactacctg
gccacggcggccgacgactcctctgtcaagctctgggacttgcgtaagctcaagaacttc
aagacgttgcagctggacaataacttcgaggtgtgtgac
DBGET
integrated database retrieval system
