Aptenodytes forsteri (emperor penguin): 103895661
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Entry
103895661 CDS
T08527
Symbol
PASD1
Name
(RefSeq) circadian clock protein PASD1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
afor
Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afor03000
]
103895661 (PASD1)
Transcription factors [BR:
afor03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
103895661 (PASD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
TED_2
Motif
Other DBs
NCBI-GeneID:
103895661
NCBI-ProteinID:
XP_019326574
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MDEDEKDRAKRASRNKSEKKRRDQFNVLIKELCTMLQGHGHPLKMDKSTILQRTIDFLQK
QKEITAQTEACEIRQDWKPSFLSNEEFTQLMLEALDGFLIALTTDGIIIYVSDSVSSLLG
HLPSDLVDQNILNFLPEREQSEVYKLLSPHVLMTDPVAADFLNAEKQIEFCCHLARGSLD
PNEPLMYEYVKFVVDFKYFTHVPTPSCNGFESAIARAFRSATEEQICLVATVRLVTPQFL
KELCNVEEPCEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHADDLELLAR
CHEHLMQFGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHLVVSYAEVRA
ERRRDLGLEESSIELASSSLKSHSSYLDVGQCGSSQDASREGVSLSSHSSRRSSHTALSD
SASTSSMRHTDTSTPTRPSVPGGQVEKAALRLTLAGSAQAIATPQAPGEHLPQHPVAQPA
VPSQHAVMPVYHFPTQLGMMHQLKEQLEERTRILQADIKTQQEELHVIKEQLQLVQDSNL
QMLMQQPIPVVFNNVQHPSPRRPPPPGTPRHTTAKKSQQQGLMGTKHYCSTHLPSPRQFL
RDPCGTAAQVQQQQQHLMRGTQAQETCLPGQASISVPLYNNPMVFSQTHPITVAAQIPTD
GSERQPQSDYSQDRSLRMLLDQSIQAMMPAANSSGQSTQSSASRQQGKFVAEQQILPPPI
QMQPITCSTARPPAPSPVFSPSLMIPHTSFTSHQANTPVHLHQWPQQQVQQHRLYLQMQG
PEPVPGGPTQRIFQPPHTTQQNPLSYFLHPQQQSRHAQGQACNLPDLPEMQLP
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatgagaaggacagggcaaagagggcatcacgcaacaaatctgaaaagaag
aggagagaccagttcaatgtcctcattaaagagctttgcacgatgctgcagggccacggc
caccctctcaagatggacaagtccacgatactgcagaggaccatcgacttcttacagaaa
cagaaagaaatcacagcacagacagaagcctgtgagattagacaagactggaagccttca
tttcttagcaacgaggagttcacccagttgatgttagaggcactagatggctttctcatt
gctcttaccactgatgggattattatttatgtatctgatagtgtctcgtctctgcttgga
cacttaccgtcagatttggtggaccaaaatatattaaactttctgcctgagcgggagcag
agtgaggtgtacaagctcctttctccacatgtgctcatgacagatcctgttgcagctgat
tttctaaacgcggaaaaacaaatagagttttgctgccatttagcaagaggcagcttagat
ccaaatgaacccctgatgtatgaatatgtgaaatttgtagtggattttaaatattttact
catgtgcctacgccctcctgtaatggctttgagtcagctattgcacgagctttcaggtca
gccacggaggagcagatttgcctcgtagcaactgttcgtcttgtcacaccgcagttctta
aaggagctctgcaatgttgaagagccatgtgaagaatttacatcgaggcatagtttggaa
tggaagtttttattcttggaccacagggctccacctattataggatatttaccctttgag
gttctgggaacgtcagggtatgattactaccacgcagatgacctggagcttcttgctagg
tgccatgaacacttgatgcagtttggaaaaggaaagtcctgttactatcggttcctgacc
aaaggccagcagtggatatggctgcagacacactactacatcacctaccaccagtggaat
tccaaacccgagttcatcgtttgcacacacctggtagttagttatgcagaagttcgagct
gaaagaaggcgagatcttggccttgaagagtcatcgattgaactggcatcctcttctcta
aagagccacagcagctacctggacgtggggcagtgcggcagcagccaggacgccagccgg
gagggagtgtcgctgtcgtcccacagctcccggcgctcctcgcacaccgccctctccgac
tccgcgtccacgtcgtccatgcgacacacggacaccagcacgcccacccggccgtcggtg
ccgggggggcaggtggagaaggcagccctacggctgacattggctggaagcgctcaggcc
atagcaactcctcaagcccctggtgaacatcttcctcagcatcccgtggctcagccagca
gtcccctctcagcacgctgtgatgccagtgtaccatttcccgacccagctggggatgatg
catcagctgaaagagcagctggaggagaggacacgcatactgcaagctgacatcaagaca
cagcaagaagagctccacgtcatcaaggagcagctccagctagtgcaggactccaacctg
cagatgctgatgcagcagccgatccctgtcgtcttcaacaacgtgcagcacccgagcccc
aggaggccgccgccgccggggacgcccaggcacaccacagccaagaagtcacaacagcaa
ggccttatggggacgaagcactactgcagcacccacctgccgtcaccgcgccaattcctc
agggacccctgtggcacggccgcccaggtacagcagcagcagcagcacctaatgagagga
acccaagcccaggaaacgtgtctgccagggcaggcgagcatttcagtgcccctctacaac
aaccccatggtgttttcgcaaacgcatcccattacagtggctgcacagataccgactgac
ggcagcgaaaggcaaccgcagtctgactacagccaggacaggagcctcaggatgctgttg
gatcagtctatccaagccatgatgcccgccgccaacagcagtggccagtccacgcaaagc
agtgccagcaggcagcaaggaaagttcgttgcagagcagcagatcttgcctcccccaata
cagatgcaaccgattacctgtagcactgcccgacctccagccccgtcgcctgttttctcc
ccatctctgatgatcccacacaccagcttcacatcccaccaggcaaacacaccggttcat
ctccaccagtggccacagcaacaagttcagcagcaccgtctctaccttcagatgcaaggt
cctgagccagtgcctgggggtccgacacagcgcattttccagcccccccacaccacacag
cagaaccccctgagctacttcctccacccgcagcagcagagccgccacgcgcagggccag
gcctgcaacctgccggacctgcccgagatgcagctgccctga
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