Aptenodytes forsteri (emperor penguin): 103895683
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Entry
103895683 CDS
T08527
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor04382
Cornified envelope formation
afor04510
Focal adhesion
afor04512
ECM-receptor interaction
afor04518
Integrin signaling
afor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103895683 (COL4A6)
04518 Integrin signaling
103895683 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103895683 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103895683 (COL4A6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
103895683 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afor04147
]
103895683 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
afor00536
]
103895683 (COL4A6)
Exosome [BR:
afor04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103895683 (COL4A6)
Glycosaminoglycan binding proteins [BR:
afor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103895683 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103895683
NCBI-ProteinID:
XP_009273636
LinkDB
All DBs
Position
Unknown
AA seq
1774 aa
AA seq
DB search
MTPHAVKRNVEIHSERNFTQNKDIFSGFNKPQSEFDPVPDKFNGKIPFDFSEILTRTVFA
NHSTVGSSTSSGDGKNHCFLSSPLPLGRTRLPPEMGDSKKGGKKYYSGPCAGRDCSAGCK
CFPEKGARGRPGPIGLQGPIGAPGFTGPEGLPGAKGERGSVGPPGPAGQTGDKGPMGVPG
FQGINGIPGHPGQSGPRGLPGLDGCNGTTGSPGVSGSDGFPGLPGLPGRPGPKGLKGEPV
FAQGSLKGMKGENGLPGLDGISGPKGFPGPIGSAGPIGLPGLQGPMGPPGPPGPKGNMGL
GFQGEKGEKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEKGDPGPQGFPGDKGLPGVPGF
GGVGEKGEKGVPGLPGGRGLLGLDGSDGILGRKGHPGIPGYPGLDGVDGMKGELGDIGPP
GPPIIIDREGVVISGAPGDPGNPGISGPPGDEGISGLPGLPGAPGFPGLERDGMGPGGSP
GIPGAKGEVGEPGRGAIGLPGTPGRGGLPGLPGAPGLPGSPGPSFPPDTILDGRTGAPGE
PGQRGLPGALGPKGYKGEAGDCACDGGVTRAGLKGISGPPGPSGSPGVPGVKGIGGDPGT
VGAPGLRGPPASAGQQGLPGLKGEKGDSSYATGRGARGDRGATAPRGPSGIPGTPGRDGL
PGLPGPPGPPGDGGLGFPGEKGLPGLPGSKGHRGETGSPGVGYPGPSGVRGPSGDPGMDG
FPGQAGLPGPPGITLPCIVPGAYGPPGIPGFPGLPGPKGSKGFPGIPGQPGLHGSKGQPG
SPGIIGLQGEPGFPGPRGEQGSQGLPGLDGTDGLPGKMGASGLAGTRGAPGDVFGAESGA
LGERGRPGLPGDKGLTGDLGFPGPKGLDGRPGLLGIKGEQGNPGYSGVPGLRGPPGPGGP
FGIKGKPGPLGSVGLAGAPGCQGLPGAKGLTGDVGPQGPAGMKGFPGLEGAPGSPGERGF
LGPPGPFGQDGHPGFSGPKGEKGSSGLLGFPGMPGLSGVPGVNGFKGTPGATGGQGSPGV
LGLQGQKGDRGDVGPPGLPVLGPPEQALQFKGNKGDPGLAGLGGFPGPRGDKGIPGSRGQ
PGLPGPTGSASKERGFRGDPGFPGPPGQPGLPGQKGTHGIIGFPGMPGERGSDGITGTLG
FPGPIGLPGPKGDQGEPAGISGIAGAKGERGDPGFPGERGREGLKGEPGYPGNTGVNGLK
GGPGDLGQEGPAGIPGNAGLRGIPGPPGPPGQPGSVGFPGARGTAGPKGFHGFPGLNGLN
GLPGTKGSPGTPGLSEAGLKGPAGLPGPKGEGGSPGLGRGALGFPGPKGSAGDMGPPGPV
GLPGLPGTPGASLPSDIHGRPGDAGHPGTDGSSGLPGPPGPRGPSGPASDQGDTGTPGFP
GVLGLRGIKGDVGPTGPIGLPGASGFKGVRGDPGLMGMPGKDGPPGDPGYPGLKGEMGHR
GLPGQQGAPGTTPQPEEITAPAGLPGLPGIDGVPGFDGDPGFQGPAGKPGTKGLPGRSGL
KGRDGLPGSPGIAGDPGPSGTPGPQGFEGVAGKPGSLGLPGMPGRSVGVGYTLVKHSQSD
QIPPCPIGMNKLWDGYSLLYVEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYAS
RNDKSYWLSTTAPIPMMPVDSVQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSL
WIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECQGARGTCHYFANKYSFWLTTV
EQSQQFVSAPPSETLKAGQLRTRVSRCQVCMKNL
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgactcctcatgctgtgaaaaggaacgtagaaatacatagtgaacgcaattttacacaa
aataaggacatattttcgggttttaataaacctcagtcagagtttgatccagttcctgat
aaattcaatggaaagattccttttgacttcagtgagattttgactagaaccgtatttgct
aaccacagcactgtggggagcagcacgagcagcggggatggaaagaatcattgctttttg
tccagtcctctgccgctgggaaggacccgattgccaccagagatgggggattctaagaag
ggtggaaagaagtattacagcgggccatgtgcaggccgtgattgcagcgctggatgcaaa
tgttttccagagaagggtgcgcggggtcgaccaggaccgattgggcttcaaggaccgata
ggtgcacctggatttactggcccagaaggtttgccgggagcaaaaggtgagagaggatca
gtgggcccccctggaccagctggacagacaggcgacaagggcccaatgggagttccagga
tttcaaggcataaacgggatcccaggtcaccctgggcaatctggacctagaggtctgcct
ggcctcgatggctgcaatggtaccactgggagtcctggcgtttctggatcagatgggttt
cctggcctacctgggctgcctggtcgtcctggcccaaaaggccttaaaggagaacctgtt
ttcgctcaaggcagtcttaaaggaatgaagggagaaaacggtcttcccggattggatgga
atttctggcccaaaaggttttccaggtccaataggttctgcaggccctataggattacca
ggtttgcagggtccaatgggtccccctgggccaccgggtccaaaaggtaacatgggatta
ggctttcaaggagagaaaggagaaaagggcgatgtagggctgcctggccctccaggtccc
ccaccatccactggaatactggaattcatgggatttccaaaagggaagcaaggagaaaag
ggtgatccaggccctcaaggattccctggagacaaaggattgcctggcgtgccgggcttt
ggaggtgttggagaaaaaggagaaaaaggtgtacctggcttaccgggtggcaggggtctt
ttgggactggatggatctgacgggattctagggagaaagggtcatccaggtattccaggc
tatccaggactggatggagtcgatggcatgaagggtgaattaggtgacatcggtccccca
ggccctcccatcattattgacagggaaggtgtagtcatttcaggtgccccaggtgaccct
ggaaacccgggaatatctggtcctccaggagatgaagggatcagcggtttaccaggcctt
ccaggagctccagggtttccaggcctggagagagatggaatgggccctggagggtctcca
ggtattccaggtgcgaagggtgaagtgggagaaccaggaagaggagcgattggattacca
ggcactcccggcagaggtggtttaccgggtctgccaggagcaccagggttgcctggttca
ccaggcccttcattccccccagacacgatcctggatggaaggactggggccccaggggag
cctggacaaagagggctgccaggagctttgggtccaaaggggtacaaaggagaggcaggt
gattgtgcttgtgatggaggagttacaagagctggtctaaaaggcatctcaggtccacca
ggtccatcgggaagccctggtgtgcctggggttaagggcattggtggagacccaggcact
gtgggcgcaccaggactgcgaggccctccggcttcagctggtcagcaaggtcttccaggc
cttaagggagaaaaaggggattcatcctacgcaacaggcagaggtgctcgtggggaccgt
ggtgccacagcacccagaggaccttcaggcatcccgggaacccctggcagggatggactt
ccaggcttgccaggcccaccaggccctccaggtgatggtgggctaggtttcccaggtgaa
aaaggactgccaggattacctggctccaagggccatcgtggagaaactggttctcctggc
gttggatatccaggtcctagtggagttcgtgggccatcaggtgacccaggaatggatggg
tttccaggacaagcaggtcttccaggccctccaggtatcaccttgccctgcatagttcct
ggagcatatgggcccccagggattcccggctttccaggactgccaggtcccaaaggcagc
aaaggctttcccggcattccaggccaacctggattacatgggtcaaaaggacagccaggg
tctccaggaataataggcttgcaaggggaacctggcttccctgggcctcgaggagagcaa
gggtcacaaggacttccaggactggatggaacagatggtttgcctgggaaaatgggtgct
tcaggcttagctggaacgaggggagctcctggagatgtatttggtgctgagagtggagcg
ctgggagagcgtggccgacctggactcccaggtgataaagggcttacaggtgatcttgga
tttccaggaccaaaagggttagatggaagaccaggcctcctaggaattaaaggcgaacag
ggtaatccaggatattcgggtgtccctggattgcgaggacctcctggtcctggaggtcct
tttggcattaagggaaaaccaggacccttggggtcagttggccttgcaggagcaccaggc
tgtcaaggacttcctggagccaaaggcttgactggagatgtaggtccacaaggccctgct
ggtatgaaaggcttcccaggtcttgaaggtgctccaggatctcctggggaaagaggattc
ttagggccacctgggccttttggtcaagatggacatccaggtttctcagggccaaaaggc
gagaaagggtcttctggcctgcttggtttccctggcatgccaggcctgtctggtgtccct
ggagtgaatgggtttaagggaactcctggcgcaactggaggacaagggagccctggagtt
ctgggactccaaggtcaaaaaggtgatagaggtgatgtaggtccacctggtcttcctgtt
cttgggcctccagaacaggcactgcaattcaaaggaaacaaaggagatcctggattagct
ggacttggaggattccctggacctagaggtgataaaggaatcccaggaagccgtggacag
cctggtctccctggtccaactgggtccgcaagcaaagagagaggttttcgtggtgaccca
ggcttccctggtccacctggacagcctgggctgccaggacagaagggtacacatggtatc
ataggatttccaggaatgccaggagagaggggttcagatggtatcacaggaacacttgga
ttcccaggtcctattggcctccctggtccaaagggtgaccagggagagcctgctggcatt
tctggcattgctggagcaaaaggagagcgaggggacccggggttcccaggagagagaggg
agagaaggactcaagggtgaaccaggctacccaggaaacactggggtgaacggactcaaa
ggcggcccaggagatcttggccaagaaggaccagcaggaatccctggaaacgctgggctg
agaggaatccctgggccaccaggacctccagggcagccaggatctgtcggattccctgga
gctcgtggaacagcaggacctaaagggtttcatggatttccaggtttaaatggtctgaat
ggcttgccaggcacaaaagggtctcctggaacaccaggtctgagtgaagccggactgaaa
ggccctgcaggtctcccaggtccgaagggcgaaggaggttctccaggcttgggtagagga
gctctaggattccctggaccaaaaggctcagcaggagacatgggtccccctggtcctgtg
ggactgcctggcttgccaggaacacctggagcttctcttccttctgatatacatgggaga
cctggggatgctggccatccaggaactgatgggagttcaggtcttccaggtcctccagga
ccacgagggccctctggcccagcttctgaccaaggtgacacaggcactccaggtttccct
ggtgttcttggcttgcgaggcattaagggtgacgtgggacccactggtccaattggactc
cctggagcatctggattcaaaggtgtaagaggggaccctggccttatggggatgccaggt
aaagatgggcctccgggggatcctggttaccctgggctgaaaggtgaaatgggccatcga
ggtctccctggccaacaaggggctccaggtacaaccccacagccagaagaaatcacagcc
cctgcaggcttacctggtctgccaggaattgatggtgtccctggctttgatggagatcct
ggattccagggcccagctggaaaaccaggtacaaaaggtctgccaggaagatctggtttg
aaaggacgtgatggtttacctggatcacctggcatagctggggatccaggaccttcaggt
accccaggaccacaaggatttgaaggtgttgccggaaagccgggctcacttggtttgcca
ggaatgcctggtcggagcgtgggcgttggatacactttagtgaagcacagtcaatcagac
caaatcccaccttgtcccataggaatgaataagctctgggacggctacagcttattgtac
gtggaggggcaggaaaagtcacacaaccaggatcttggttttgctggctcatgtttgcct
cgcttcagcaccatgccttttatttactgcaacatcaatgaagtgtgctactacgccagc
cgaaatgacaagtcctactggctctccaccactgctcctatccccatgatgccagtggac
agtgttcagatcccacagtacatcagtcgttgctcagtatgtgaagcaccttcccaggct
gtggctgtgcacagccaggacatcaccatcccacagtgtccccttggttggcgcagccta
tggataggatactccttccttatgcatactgcggctggtgcagaaggtggaggtcagtcc
cttgtctcacccggttcttgcctggaggatttccgtgctactccattcattgaatgccag
ggtgctaggggaacgtgccattactttgcaaacaaatacagcttctggctgacgactgtt
gaacagtcgcagcagtttgtcagtgctcctccctcagaaactctgaaagcaggacagctt
cgaacaagggtcagccgttgccaagtgtgcatgaagaatttgtag
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integrated database retrieval system
