Aptenodytes forsteri (emperor penguin): 103895683
Help
Entry
103895683 CDS
T08527
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor04510
Focal adhesion
afor04512
ECM-receptor interaction
afor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103895683 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103895683 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103895683 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afor04147
]
103895683 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
afor00536
]
103895683 (COL4A6)
Exosome [BR:
afor04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103895683 (COL4A6)
Glycosaminoglycan binding proteins [BR:
afor00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103895683 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103895683
NCBI-ProteinID:
XP_009273636
LinkDB
All DBs
Position
Unknown
AA seq
1774 aa
AA seq
DB search
MTPHAVKRNVEIHSERNFTQNKDIFSGFNKPQSEFDPVPDKFNGKIPFDFSEILTRTVFA
NHSTVGSSTSSGDGKNHCFLSSPLPLGRTRLPPEMGDSKKGGKKYYSGPCAGRDCSAGCK
CFPEKGARGRPGPIGLQGPIGAPGFTGPEGLPGAKGERGSVGPPGPAGQTGDKGPMGVPG
FQGINGIPGHPGQSGPRGLPGLDGCNGTTGSPGVSGSDGFPGLPGLPGRPGPKGLKGEPV
FAQGSLKGMKGENGLPGLDGISGPKGFPGPIGSAGPIGLPGLQGPMGPPGPPGPKGNMGL
GFQGEKGEKGDVGLPGPPGPPPSTGILEFMGFPKGKQGEKGDPGPQGFPGDKGLPGVPGF
GGVGEKGEKGVPGLPGGRGLLGLDGSDGILGRKGHPGIPGYPGLDGVDGMKGELGDIGPP
GPPIIIDREGVVISGAPGDPGNPGISGPPGDEGISGLPGLPGAPGFPGLERDGMGPGGSP
GIPGAKGEVGEPGRGAIGLPGTPGRGGLPGLPGAPGLPGSPGPSFPPDTILDGRTGAPGE
PGQRGLPGALGPKGYKGEAGDCACDGGVTRAGLKGISGPPGPSGSPGVPGVKGIGGDPGT
VGAPGLRGPPASAGQQGLPGLKGEKGDSSYATGRGARGDRGATAPRGPSGIPGTPGRDGL
PGLPGPPGPPGDGGLGFPGEKGLPGLPGSKGHRGETGSPGVGYPGPSGVRGPSGDPGMDG
FPGQAGLPGPPGITLPCIVPGAYGPPGIPGFPGLPGPKGSKGFPGIPGQPGLHGSKGQPG
SPGIIGLQGEPGFPGPRGEQGSQGLPGLDGTDGLPGKMGASGLAGTRGAPGDVFGAESGA
LGERGRPGLPGDKGLTGDLGFPGPKGLDGRPGLLGIKGEQGNPGYSGVPGLRGPPGPGGP
FGIKGKPGPLGSVGLAGAPGCQGLPGAKGLTGDVGPQGPAGMKGFPGLEGAPGSPGERGF
LGPPGPFGQDGHPGFSGPKGEKGSSGLLGFPGMPGLSGVPGVNGFKGTPGATGGQGSPGV
LGLQGQKGDRGDVGPPGLPVLGPPEQALQFKGNKGDPGLAGLGGFPGPRGDKGIPGSRGQ
PGLPGPTGSASKERGFRGDPGFPGPPGQPGLPGQKGTHGIIGFPGMPGERGSDGITGTLG
FPGPIGLPGPKGDQGEPAGISGIAGAKGERGDPGFPGERGREGLKGEPGYPGNTGVNGLK
GGPGDLGQEGPAGIPGNAGLRGIPGPPGPPGQPGSVGFPGARGTAGPKGFHGFPGLNGLN
GLPGTKGSPGTPGLSEAGLKGPAGLPGPKGEGGSPGLGRGALGFPGPKGSAGDMGPPGPV
GLPGLPGTPGASLPSDIHGRPGDAGHPGTDGSSGLPGPPGPRGPSGPASDQGDTGTPGFP
GVLGLRGIKGDVGPTGPIGLPGASGFKGVRGDPGLMGMPGKDGPPGDPGYPGLKGEMGHR
GLPGQQGAPGTTPQPEEITAPAGLPGLPGIDGVPGFDGDPGFQGPAGKPGTKGLPGRSGL
KGRDGLPGSPGIAGDPGPSGTPGPQGFEGVAGKPGSLGLPGMPGRSVGVGYTLVKHSQSD
QIPPCPIGMNKLWDGYSLLYVEGQEKSHNQDLGFAGSCLPRFSTMPFIYCNINEVCYYAS
RNDKSYWLSTTAPIPMMPVDSVQIPQYISRCSVCEAPSQAVAVHSQDITIPQCPLGWRSL
WIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATPFIECQGARGTCHYFANKYSFWLTTV
EQSQQFVSAPPSETLKAGQLRTRVSRCQVCMKNL
NT seq
5325 nt
NT seq
+upstream
nt +downstream
nt
atgactcctcatgctgtgaaaaggaacgtagaaatacatagtgaacgcaattttacacaa
aataaggacatattttcgggttttaataaacctcagtcagagtttgatccagttcctgat
aaattcaatggaaagattccttttgacttcagtgagattttgactagaaccgtatttgct
aaccacagcactgtggggagcagcacgagcagcggggatggaaagaatcattgctttttg
tccagtcctctgccgctgggaaggacccgattgccaccagagatgggggattctaagaag
ggtggaaagaagtattacagcgggccatgtgcaggccgtgattgcagcgctggatgcaaa
tgttttccagagaagggtgcgcggggtcgaccaggaccgattgggcttcaaggaccgata
ggtgcacctggatttactggcccagaaggtttgccgggagcaaaaggtgagagaggatca
gtgggcccccctggaccagctggacagacaggcgacaagggcccaatgggagttccagga
tttcaaggcataaacgggatcccaggtcaccctgggcaatctggacctagaggtctgcct
ggcctcgatggctgcaatggtaccactgggagtcctggcgtttctggatcagatgggttt
cctggcctacctgggctgcctggtcgtcctggcccaaaaggccttaaaggagaacctgtt
ttcgctcaaggcagtcttaaaggaatgaagggagaaaacggtcttcccggattggatgga
atttctggcccaaaaggttttccaggtccaataggttctgcaggccctataggattacca
ggtttgcagggtccaatgggtccccctgggccaccgggtccaaaaggtaacatgggatta
ggctttcaaggagagaaaggagaaaagggcgatgtagggctgcctggccctccaggtccc
ccaccatccactggaatactggaattcatgggatttccaaaagggaagcaaggagaaaag
ggtgatccaggccctcaaggattccctggagacaaaggattgcctggcgtgccgggcttt
ggaggtgttggagaaaaaggagaaaaaggtgtacctggcttaccgggtggcaggggtctt
ttgggactggatggatctgacgggattctagggagaaagggtcatccaggtattccaggc
tatccaggactggatggagtcgatggcatgaagggtgaattaggtgacatcggtccccca
ggccctcccatcattattgacagggaaggtgtagtcatttcaggtgccccaggtgaccct
ggaaacccgggaatatctggtcctccaggagatgaagggatcagcggtttaccaggcctt
ccaggagctccagggtttccaggcctggagagagatggaatgggccctggagggtctcca
ggtattccaggtgcgaagggtgaagtgggagaaccaggaagaggagcgattggattacca
ggcactcccggcagaggtggtttaccgggtctgccaggagcaccagggttgcctggttca
ccaggcccttcattccccccagacacgatcctggatggaaggactggggccccaggggag
cctggacaaagagggctgccaggagctttgggtccaaaggggtacaaaggagaggcaggt
gattgtgcttgtgatggaggagttacaagagctggtctaaaaggcatctcaggtccacca
ggtccatcgggaagccctggtgtgcctggggttaagggcattggtggagacccaggcact
gtgggcgcaccaggactgcgaggccctccggcttcagctggtcagcaaggtcttccaggc
cttaagggagaaaaaggggattcatcctacgcaacaggcagaggtgctcgtggggaccgt
ggtgccacagcacccagaggaccttcaggcatcccgggaacccctggcagggatggactt
ccaggcttgccaggcccaccaggccctccaggtgatggtgggctaggtttcccaggtgaa
aaaggactgccaggattacctggctccaagggccatcgtggagaaactggttctcctggc
gttggatatccaggtcctagtggagttcgtgggccatcaggtgacccaggaatggatggg
tttccaggacaagcaggtcttccaggccctccaggtatcaccttgccctgcatagttcct
ggagcatatgggcccccagggattcccggctttccaggactgccaggtcccaaaggcagc
aaaggctttcccggcattccaggccaacctggattacatgggtcaaaaggacagccaggg
tctccaggaataataggcttgcaaggggaacctggcttccctgggcctcgaggagagcaa
gggtcacaaggacttccaggactggatggaacagatggtttgcctgggaaaatgggtgct
tcaggcttagctggaacgaggggagctcctggagatgtatttggtgctgagagtggagcg
ctgggagagcgtggccgacctggactcccaggtgataaagggcttacaggtgatcttgga
tttccaggaccaaaagggttagatggaagaccaggcctcctaggaattaaaggcgaacag
ggtaatccaggatattcgggtgtccctggattgcgaggacctcctggtcctggaggtcct
tttggcattaagggaaaaccaggacccttggggtcagttggccttgcaggagcaccaggc
tgtcaaggacttcctggagccaaaggcttgactggagatgtaggtccacaaggccctgct
ggtatgaaaggcttcccaggtcttgaaggtgctccaggatctcctggggaaagaggattc
ttagggccacctgggccttttggtcaagatggacatccaggtttctcagggccaaaaggc
gagaaagggtcttctggcctgcttggtttccctggcatgccaggcctgtctggtgtccct
ggagtgaatgggtttaagggaactcctggcgcaactggaggacaagggagccctggagtt
ctgggactccaaggtcaaaaaggtgatagaggtgatgtaggtccacctggtcttcctgtt
cttgggcctccagaacaggcactgcaattcaaaggaaacaaaggagatcctggattagct
ggacttggaggattccctggacctagaggtgataaaggaatcccaggaagccgtggacag
cctggtctccctggtccaactgggtccgcaagcaaagagagaggttttcgtggtgaccca
ggcttccctggtccacctggacagcctgggctgccaggacagaagggtacacatggtatc
ataggatttccaggaatgccaggagagaggggttcagatggtatcacaggaacacttgga
ttcccaggtcctattggcctccctggtccaaagggtgaccagggagagcctgctggcatt
tctggcattgctggagcaaaaggagagcgaggggacccggggttcccaggagagagaggg
agagaaggactcaagggtgaaccaggctacccaggaaacactggggtgaacggactcaaa
ggcggcccaggagatcttggccaagaaggaccagcaggaatccctggaaacgctgggctg
agaggaatccctgggccaccaggacctccagggcagccaggatctgtcggattccctgga
gctcgtggaacagcaggacctaaagggtttcatggatttccaggtttaaatggtctgaat
ggcttgccaggcacaaaagggtctcctggaacaccaggtctgagtgaagccggactgaaa
ggccctgcaggtctcccaggtccgaagggcgaaggaggttctccaggcttgggtagagga
gctctaggattccctggaccaaaaggctcagcaggagacatgggtccccctggtcctgtg
ggactgcctggcttgccaggaacacctggagcttctcttccttctgatatacatgggaga
cctggggatgctggccatccaggaactgatgggagttcaggtcttccaggtcctccagga
ccacgagggccctctggcccagcttctgaccaaggtgacacaggcactccaggtttccct
ggtgttcttggcttgcgaggcattaagggtgacgtgggacccactggtccaattggactc
cctggagcatctggattcaaaggtgtaagaggggaccctggccttatggggatgccaggt
aaagatgggcctccgggggatcctggttaccctgggctgaaaggtgaaatgggccatcga
ggtctccctggccaacaaggggctccaggtacaaccccacagccagaagaaatcacagcc
cctgcaggcttacctggtctgccaggaattgatggtgtccctggctttgatggagatcct
ggattccagggcccagctggaaaaccaggtacaaaaggtctgccaggaagatctggtttg
aaaggacgtgatggtttacctggatcacctggcatagctggggatccaggaccttcaggt
accccaggaccacaaggatttgaaggtgttgccggaaagccgggctcacttggtttgcca
ggaatgcctggtcggagcgtgggcgttggatacactttagtgaagcacagtcaatcagac
caaatcccaccttgtcccataggaatgaataagctctgggacggctacagcttattgtac
gtggaggggcaggaaaagtcacacaaccaggatcttggttttgctggctcatgtttgcct
cgcttcagcaccatgccttttatttactgcaacatcaatgaagtgtgctactacgccagc
cgaaatgacaagtcctactggctctccaccactgctcctatccccatgatgccagtggac
agtgttcagatcccacagtacatcagtcgttgctcagtatgtgaagcaccttcccaggct
gtggctgtgcacagccaggacatcaccatcccacagtgtccccttggttggcgcagccta
tggataggatactccttccttatgcatactgcggctggtgcagaaggtggaggtcagtcc
cttgtctcacccggttcttgcctggaggatttccgtgctactccattcattgaatgccag
ggtgctaggggaacgtgccattactttgcaaacaaatacagcttctggctgacgactgtt
gaacagtcgcagcagtttgtcagtgctcctccctcagaaactctgaaagcaggacagctt
cgaacaagggtcagccgttgccaagtgtgcatgaagaatttgtag
DBGET
integrated database retrieval system
