Aptenodytes forsteri (emperor penguin): 103895846
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Entry
103895846 CDS
T08527
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
afor
Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afor03041
]
103895846 (DDX1)
03016 Transfer RNA biogenesis [BR:
afor03016
]
103895846 (DDX1)
Enzymes [BR:
afor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103895846 (DDX1)
Spliceosome [BR:
afor03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103895846 (DDX1)
Transfer RNA biogenesis [BR:
afor03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
103895846 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
103895846
NCBI-ProteinID:
XP_009273836
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAGVSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTTQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPPHIRNQALFAACVLKNAELKF
NFGEDDFKFPPKDGYIGLCKAPDGSVVKSQHSGNAQVVQTQNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG
EIEEHLNCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggtttcggaaatgggtgttatgcctgagatagctcaagcagtggaggagatg
gactggcttcttcctacggatatccaagcagaatccatcccactgatcctgggaggtggt
gacgtacttatggctgctgaaacagggagtggaaaaactggtgcttttagcattccagtt
atccagattgtttatgaaacgctgaaggaccagatggaaggcaagaaagggaaagcaact
attaaaaccggtggggcagtgctcaataaatggcagatgaacccatatgatagaggatca
gcttttgcaattgggtcggacggtttgtgttgtcaaagcagagaggtaaaagaatggcat
ggatgcagagcaactagaggcgtgactaaagggaaatactactatgaagtttcctgtcat
gaccaaggcttgtgcagagttggttggtcaactacgcaggcttcactagatttgggcact
gataaatttggctttggctttggcggcactggtaagaaatctcacaacaagcaatttgac
agctatggtgaggaattcactatgcatgatacaattgggtgttatctagacatagataaa
ggacaaataaaattttccaaaaacgggaaggaccttggccttgcgtttgaaatcccacca
cacataaggaaccaagcactttttgcagcttgtgtactgaagaatgctgaattgaaattc
aattttggtgaagatgacttcaagtttccgccaaaagatggctatattggtctttgcaag
gctcctgatggtagcgttgtaaaatcacaacactcaggaaatgcccaagtggttcaaaca
cagaaccttccaaatgctccgaaagcattgattgtagaaccgtcaagagagcttgcagaa
caaactttgaacaatgtgaagcagttcaaaaaatatgtcgataatcccaaattaagggaa
ctgttgattattggtggggttgctgcaagagatcaactctctgtattggaacaaggagtg
gatattgtcgttggcactcctggaagactggatgacctggtctcaacgggaaagcttaat
ttatctcaagttagattcctggttctggatgaagctgatggccttctcctccaaggttat
tcagatttcataaacaggatccacagtcaaattcctcagataacttcagatggaaagaga
cttcaggtgattgtgtgctctgcaacactacattcttttgatgtgaaaaaactatctgaa
aagatcatgcattttcccacctgggttgatttgaaaggagaagattctgtccctgaaact
gtacaccatgtagttgtgcctgtaaatccaaaagcagataaactctgggaaaggcttggc
aagaatcatatcagaactgatgaagtacatgcaaaagacaatacacgacctggtgctaac
actccagaaatgtggtctgaagctattaaaattctaaaaggagaatacactgttcgggca
atcaaagaacacaagatggaccaagccattattttctgcaggactaaaatagactgtgat
aatatggagcagtacttcatccaacagggtggaggccctgataggaagggacatcagttc
tcatgtgtctgtctgcatggtgacagaaaacctcaagaaagaaagcaaaacctggaaaga
tttaagagaggagatgtccgtttcttgatctgcacagatgttgctgctagaggaattgat
attcatggtgttccatatgttatcaacgtcacactccctgatgaaaaacagaactatgtt
catcgaattgggagagtaggcagagctgagaggatgggtctggcaatctcccttgtggca
aaagagaaagaaaaggtttggtatcatgtatgcagcagtcgtggaaaagggtgttacaac
actagactgaaggaagaaggaggttgtaccatatggtacaatgagatgcagttgctgggg
gagattgaagaacacttaaactgcactattgcccaagttgaaccagacataaaagtacca
gttgatgattttgatgggaaagttacatatgggcagaagagagctctgggtggtgggctg
tataaaggccatgtggatattctggcacctacagtacaagagttggctgcccttgaaaag
gaggctcagacatctttcttgcatcttggctatcttcctaaccagctgttcagaacgttc
tga
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