Aptenodytes forsteri (emperor penguin): 103895964
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Entry
103895964 CDS
T08527
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103895964 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afor01009
]
103895964 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afor04515
]
103895964 (PCDH20)
Protein phosphatases and associated proteins [BR:
afor01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103895964 (PCDH20)
Cell adhesion molecules [BR:
afor04515
]
Cadherins
Protocadherins
103895964 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
SGBP_BT4661-like
He_PIG
Motif
Other DBs
NCBI-GeneID:
103895964
NCBI-ProteinID:
XP_009273990
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MARRGASAAGVWGRQDAPGPSVAVRICCGECSWCCPEGTDGDALELAAHLLLFLLFVGPF
NCFASYSRATELFYSLNEGLPAGVLIGSLARDLRLSTAGGQHPAAPQPPLSFTLASRGLG
GQYVQLDNRSGELHTSAVEIDRETLCMESSGATIFGGAAAVSSSSPSSESCLLLLDVLVL
PQEYFRLVKVKIAIRDVNDNAPHFPVPHIRLSVPENAPVNTRLAIEHPALDPDVGTNGVQ
TYRLQDNYGVFTLDVEENESGERTPYLIVMGSLDRETREEYVTVIVAEDGGSPPLVGSAT
LTIGISDINDNCPQFSDSQLNVTLYGNSSLGTHVATVHAVDMDLGSNAQITYSYSQKVPQ
PSRDLFHLDESTGTITLSSKVDGDTPRLHRLIILGNGPGCIPAVITVLVTIIKVMMRPPE
VVPRFIANEAEGVVYLKELEPINTPIAFFTIKDPDEKYKVNCYLDGDGPFRLSPYKPYNN
EYLLETTKPLDYETQQLYEISVVAWNSEGFHVNRIIKVQVLDDNDNSPVFSQQLIELSIE
ENNVPNAFLTKLHATDADSGERGQVSYFLGPDAPSYFSLDKATGVLTVSTQLDREEKEKY
RYTVKAVDSGFPPRESIATVTITVLDKNDNSPRFINKDFSFFVPENFPGFGEIGVISVTD
ADAGQNGWVALSVLNGSDIFVIDTGKGVLRAKVSLDREQQSSYVLWIEAVDGGDPALSST
AKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPITEVYAVDKDTGMNAVIAYSII
GRRGPRPESFRIDPKTGNITLEESLMQNDYGLYRLLVKVSDHGYPEPLHSTVMVNLFVND
TVSNESYIESLLRKEPDISIEEKQPQISIEPTHKKMESASCMPTLVALSIISLGSIALVT
GMGIYICLRKGKKHHRADENVEVQIPLNGRINLHMLEKKPMEISNI
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcggggcgcaagtgctgctggtgtgtgggggaggcaggatgcccctgggcca
tccgtggcagtgcgtatttgctgtggggaatgcagctggtgttgcccggagggtacagat
ggcgatgccctggaattagctgctcacttgctcctcttcctgctcttcgttggacctttc
aactgctttgccagttacagccgtgccacagagctcttctacagcctcaacgaggggctc
cctgctggggtgctcattggcagcctggcccgtgacctgcggctgtcgacagctggtggg
cagcaccctgcggccccccagcccccactctccttcaccctggcttcccgtggcttaggg
ggacagtacgtacagctggacaaccgctctggagagctgcacacctcggccgtggagata
gaccgggaaactctgtgcatggagagcagtggggccaccatctttgggggagcagctgct
gtctcctcctcctcaccctcatctgagtcatgcctgctgctgctggatgtgctggtgctg
ccgcaggagtacttccgcctggtgaaggtaaaaattgctatccgggatgtcaatgacaat
gcaccccacttccctgtgccccacatccgcctctcggtgcccgagaatgcacctgtaaac
acccgcctggctatcgagcaccccgcccttgaccctgacgtgggcaccaacggtgtccag
acctaccgcctgcaagataactacggtgttttcaccctggatgtggaggagaatgagagc
ggggagaggactccctacctgattgtcatggggtctctggacagggaaacacgggaggag
tatgtcacagtcatcgttgctgaggatggggggagtcctccgcttgtgggcagtgccacc
ctcactattggcatcagcgacatcaatgacaactgcccccagttcagcgactcgcagctc
aatgtcactctttatgggaattccagtctagggacacacgtggccactgtccatgcagta
gacatggaccttggatccaatgcccagatcacctactcctacagccagaaggttccccag
ccatccagagacttgttccatctggacgaaagcacaggaaccatcacgctctccagtaaa
gttgatggggacactccaaggctccacaggctgatcatactgggcaacggtcctggttgt
atccctgctgtgatcacagtgctagtgacaatcatcaaagtcatgatgaggccacctgaa
gttgtccctcgtttcatagctaatgaagcagaaggggtggtgtacttaaaggaactggag
cctatcaacacaccgatagcattttttaccatcaaagaccctgatgaaaaatacaaagtc
aattgctatttggatggtgatgggcctttcagactttcaccatacaagccatacaataat
gaatatctgttggagaccacaaagcctttggactatgagacacagcagctgtatgaaatc
tctgtagttgcgtggaactcagaaggatttcatgtcaacagaataatcaaagtacaggtt
ctggatgacaacgacaactctccagttttctctcaacagctgatagaattatccattgag
gagaacaacgttcccaatgctttcttgaccaaactgcatgctacagatgctgacagtgga
gaaagagggcaagtgtcctattttttagggcctgatgccccttcctatttttctttagat
aaagccacaggagttcttacagtttccacccaactggacagagaagaaaaagagaaatac
agatatactgtcaaagcagtagattctggcttccctccaagagaatcaatagcaactgtc
accatcactgtattggataaaaatgataatagtccaagatttatcaataaggatttcagc
tttttcgtgccagaaaactttccaggttttggtgaaatcggagttataagtgtcacagat
gctgatgcagggcaaaatggatgggttgccctttccgttctgaatggaagcgatattttt
gtcatagatactggaaagggagttttgagagctaaggtctccctggacagggagcagcaa
agctcctatgttctgtggatcgaagcagttgatggcggtgatcctgccctctcctctact
gcaaaaataactatccttcttctggacataaatgacaacccccctttggtcttgtttcct
caatctaatatgtcttatttgttggtccttccttctacccttcctggctctcccatcact
gaggtctatgctgttgataaggacactggtatgaatgcagtcatagcttacagcatcata
ggaagaagaggccctcgaccggagtcatttaggattgaccctaaaactggtaatatcacc
ttggaagagtcacttatgcaaaatgactacggcctctatcggctgcttgtaaaagttagt
gatcacggctatccagaacctctccattccaccgtcatggtgaaccttttcgtcaatgac
actgttagcaatgagagctacattgaaagtttgttaagaaaggagcctgatatcagtata
gaagaaaagcagccacaaatatccatagagcctacacataaaaaaatggagtcagcatcc
tgcatgcctaccttggtagctctgtcaataataagcttgggatcaattgctttagtaaca
gggatgggcatttacatctgtctaagaaaaggaaaaaagcatcacagagcagatgaaaac
gtggaagtacaaatcccattaaatggaagaattaacctgcacatgttggagaagaaaccg
atggagatttctaacatttga
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integrated database retrieval system
