Aptenodytes forsteri (emperor penguin): 103895966
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Entry
103895966 CDS
T08527
Symbol
VPS50
Name
(RefSeq) LOW QUALITY PROTEIN: syndetin
KO
K23288
syndetin
Organism
afor
Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afor04131
]
103895966 (VPS50)
Membrane trafficking [BR:
afor04131
]
Protein recycling
Others
EARP complex
103895966 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
ERp29
Motif
Other DBs
NCBI-GeneID:
103895966
NCBI-ProteinID:
XP_009273991
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search
MTKRKHAQVPARSLCDNRQIGVRDDTTGLCQFPFSTYTFRALGRGTVTCLCLIANGFDPK
GGKAVEGLRSPQESVHDLSPIESFRIPSKEELRELREEPTDPQAQQEIINSIEEVYFSND
SFDIVKYELERLPPVLSLQELEEYTDKLKQQQAAVSKKVADLILEKQPAYVQELERVTSL
QTGLQLAAVICTNGRRHLNIAKEGFTQTSLGLLANQRKRQLLIGLLKSLRTIKTLQRTDV
RLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKIC
KNFDISHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNTDTKFQ
KLQYKDLCTHITSDSYIPCLADLCKALWEVMLSYYRTMQWHENHDQDEAAAVSSVSDGSN
VIGTEENSFDRSYVKKKLEHGLSRIWQDVQLKVKTYLLGTDLSNFKYDDFIFVLDVTSRL
MQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLEELRMFLENETWELCPVKSSFSILQ
LHEFKFMEQSRSPSVSPSKQPASAISTTVTLFEQYCNGGNPFEIQADSKDDETEDVLASN
GYXSDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKRSDYNLNKV
NAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAVYTFFGRNDTFES
TGLGLSSSRLRTTLNRIQESLIDLEVSADPTGTLTAAEERKEKVPSPHLSHLVVLTSGNS
LYGLAERVVATESLVFLAEQFECLQPHLDAVMPAAKKPFLQQFYSQTVSTASELRKPVYW
IVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEEFNRRLNEVSKRVRIPLP
VSNILWEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKEF
VETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDIDRP
KR
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaacggaagcatgcacaggtgccagcacgtagcttgtgcgataacagacaaatt
ggcgttagagatgacacgactggtctgtgtcagtttcctttttccacgtatacttttaga
gcgctgggccgtggtactgtaacatgtctttgtctgatagcaaacggttttgatccaaag
ggaggcaaggcagtggagggtctaagaagtcctcaggagagtgttcatgacctcagtcct
attgaaagctttcggattcctagtaaggaggagctcagagaactacgtgaagaaccaact
gatcctcaagctcagcaagaaataattaacagcattgaagaggtttatttttccaatgat
tcctttgatattgtgaagtatgagttagagaggcttcctccagtacttagtcttcaagaa
ctggaagagtacacagacaaattaaaacaacagcaagctgctgtatctaagaaagttgca
gacttgattcttgaaaaacagcctgcatatgttcaggaacttgaacgtgttacatcattg
cagactggccttcagttagcagctgttatttgcacaaatggaagaagacacctgaatata
gcaaaggaaggcttcacacaaactagtttggggcttcttgcaaatcaaaggaaacgacag
ttgcttattggactgctaaagtctctgagaacaataaaaacattgcaaagaactgatgtg
cgtttgagtgagatgttggaggaagaggactatccaggagctattcagctgtgcttggaa
tgccagaaagctgccagcactttcaaacactacagttgtataagtgagttgaattcaaaa
ctgcaagacaccttggaacaaatagaggaacaattggatgtagcgctctccaaaatatgc
aagaactttgatatcagtcattatacaaaggttcagcaggcttacaggctgcttggaaaa
acacagacagcaatggaccagttacatatgcacttcactcaagccattcacaacactgtg
tttcaagtagtccttggatatgtggagctgtgtgcaggaaacacagacaccaagtttcag
aagttacagtacaaagacctctgtacacatattacatcagacagttacattccatgcctt
gctgatctctgcaaagccctttgggaggtcatgctcagttactaccgaacgatgcagtgg
catgagaatcatgaccaagatgaggcagcagctgtgtcttctgtttcagatggcagcaat
gtgattggaactgaagagaacagttttgaccgcagctatgtaaaaaagaaactggaacat
gggctttcacgaatatggcaggatgttcagctgaaagtgaaaacatatcttctgggaaca
gatctgtctaacttcaaatatgacgacttcatatttgtacttgatgttaccagcaggctg
atgcaagttggagaagaattttgtggcagtaagtctgaagttttgcaagaatctatcaga
aaacaaagtgttaactatttcaaaacataccacagaacccgtcttgaagaattaagaatg
tttttggagaatgaaacctgggaactttgtcctgttaaatcaagctttagtattctgcag
cttcatgaatttaagttcatggagcagtcacgttccccatctgtgtcacctagtaagcag
cctgcttcagcaatttcaacaacagtaacattatttgagcagtactgtaatggaggaaac
ccatttgaaattcaggccgacagcaaagatgatgagacagaagacgtgttagcttccaat
gggtactaatcagatgaacaagaaaaaagtgcatatcaagagtatgatagtgacagtgat
gttcctgaagagttgaaaagagattatgtggacgagcagacaggagatgcccctgtgaaa
agtgtttctcgagaaactctgaagagcagaaagagatcagattataacctcaataaagtg
aatgcacctatcctaacaaacactacactgaatgtaataaggcttgttgggaaatacatg
cagatgatgaatattctgaaaccaattgcatttgatgtgatccacttcatgtcccagctc
ttcgattactatctgtatgcagtctatacgttttttggccgaaatgacacgtttgaatca
acaggactgggcctcagtagcagcagattacgcaccacactgaacagaatccaggagagt
ctgattgatctggaggtctctgctgatcccacgggaactctcacagctgctgaagagaga
aaggagaaggtgccaagcccacatctcagtcatctcgtagttttgacatctggcaattca
ctgtacggtttggcagagagagtggtggccacggaatcattggtatttctggctgagcag
tttgagtgtcttcagcctcatcttgatgcagtgatgccagctgccaagaagccttttctt
cagcagttctattctcagacagtgtcaactgccagtgaactacgtaaaccagtttattgg
attgttgctgctaaagccattgattatgaacaaatgctgcttctcatggctaatgtgaaa
tgggatgtgaaggaaatcatgtcacaacacaatatatatgtagatgctcttttaaaggaa
tttgaagaatttaacagaaggttgaacgaggtgtctaagagagtccgtattccactgcct
gtctccaacatcctctgggagcactgcatacgtttggccaatagaactctcgtggaaggt
tatgccaatgtaaagaagtgcagcaatgaaggacgtgccttgatgcaactggactttcaa
caattcttaatgaaattagaaaagttaacagacattaggcctattccagataaggaattt
gtggagacctacattaaagcatactacctaacagaaaatgacatggaacgctggataaaa
gaacatagggaatattccactaagcagttgaccaatctggtgaatgtttgtctgggatcc
cacatcaacaaaaaggcaagacagaagctgctagctgctattgacgacatagacaggcct
aaaagataa
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