Aptenodytes forsteri (emperor penguin): 103896082
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Entry
103896082 CDS
T08527
Symbol
RC3H1
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
afor
Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afor03000
]
103896082 (RC3H1)
04121 Ubiquitin system [BR:
afor04121
]
103896082 (RC3H1)
Transcription factors [BR:
afor03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
103896082 (RC3H1)
Ubiquitin system [BR:
afor04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103896082 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
zf_CCCH_4
FYVE
zf-CCCH_4
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_10
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
103896082
NCBI-ProteinID:
XP_019326703
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGAEDTKHYEEGKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGTDQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSGAILSEE
GGVDLPNRKTSALPNGIVSTGSTVTQLISRGTDSGYETALKPGKMDHLSSSAPGSPPDLL
ESVPKSSISALPVNPHPVPARAPADLPSVSVTKQLQMVPRGSQLYNTQQADMFYQDPRGA
APPFEPAPYQQGVYYPTQSMSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVSPQYTQPQQY
PPMGQPIYPPHYDSRRVYPPVQPYQREEIVRGSPVPIEIPQAAVPSYVPESRDRYQQTEG
YCPVAPHLNQIRPSCHRPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSPTLPHPFHSE
EYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAARSVEMVNVDSKAMR
DQRLDMQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNSGPMQAMAVQGATTKSI
ISDYNPYGTHSGWGGSPYSPHQNIPSQGRFNDRERLSMSDVAGHGKQLPSAEREQQLRME
LQQVDHQISQQTQMRGLEAVSNRLLLQREATTLAGQPQPPPPPPKWPGMISSEQLSLELH
QVEREIGKRTRELSMESQSSLDIKNKLGTTKQTENGQLEPQSKVPAEDLALTFSSDVPNG
SALTQENIGLLSNKTASLSLSEDPEGGGDNHDSQRAGVTPTSAP
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgcccgatttgcacacagact
ttcgacgaaacaatccggaagcccatcagcttgggttgtggccacactgtctgcaagatg
tgcctcaacaagctccaccgtaaggcatgcccttttgaccagaccactatcaatacagac
attgaactccttcctgtgaactcagccttgctgcaactagtgggtgctcaggttcctgag
cagcagccaattactttatgtagtggagctgaagataccaagcattatgaggagggcaag
aaatgtgtggaagaattagcattgtacctcaaaccactcagcagtgcgagaggtgtgggt
cttaacagtactactcagagcgtgctaagtcgtcccatgcaaaggaaacttgtgacatta
gttcactgccagctagtggaggaagaagggcggatcagagccatgcgtgcagcgcggtcg
cttggtgaaagaacagtcacagaactcattcttcagcatcaaaatcctcagcagctctct
tccaacctctgggctgcagtgagagccagagggtgccagttccttggaccagcaatgcaa
gaggaggctttaaagctggttctactggctctggaagatggatctgcgttgtcacgaaaa
gtcttggttctctttgtggttcagaggctggagccgcgatttcctcaggcttctaaaact
agcattgggcatgttgtccagcttctttacagagcctcgtgcttcaaggtgacaaagcga
gatgaggattcctccttgatgcaactgaaggaggaatttcggacttacgaagctctgaga
agggaacatgactcccagatagttcaaattgctatggaagcaggtttacgcattgcacca
gatcagtggtcctcactgttatatggagaccaatctcacaaatcccacatgcagtctatc
attgacaagttgcagaccccagcctcatttgcacagagtgttcaggaattaactattgct
cttcagaggactggagatccagctaacctgaatcgtcttcgacctcacctagagctcttg
gcaaatattgatcccagtccagatgctccacctccaacatgggaacaactggaaaatgga
ctagttgctgtgaggactgtggttcatggcttagttgattatatccagaatcacagcaag
aaaggaacagatcagcaacagcctcctcagcacagcaagtacaagacatacatgtgccga
gacatgaaacagagaggaggatgcccccgaggggccagctgcacctttgcacattcacag
gaggaactagaaaaattccgtaaaatgaacaagcgtctggttcccagaagacccctgagt
gcctccctgggccagctaaatgaggtgggcctgccttcaggagctatcctctcagaggaa
gggggagtggacttgcccaataggaaaacttctgctctgccaaatggaattgtgtcaaca
ggcagcacggtgacgcaacttatttctcgagggactgactccggttacgaaactgctctg
aagccagggaagatggaccatctgagtagcagtgcccctggatcccctcctgacttgctc
gaatctgtccccaagagctctatttctgccttaccagtgaaccctcatcctgtgcctgct
cgggcaccagcagatctgccttcagtgtccgtcaccaagcagttgcaaatggtaccacgg
gggtctcagttgtataatactcagcaagcagatatgttttatcaagaccctagaggagct
gccccaccatttgagccagcaccctaccaacaaggagtttactatcctactcagtccatg
tctcgctttgtccgaccgcctccatcagctcctgaacctggtccaccttatttagaccat
tacccaccctaccttcaggatcgtgtggtgagcccacagtacacgcagccgcagcagtat
cctcctatgggacaacccatatacccaccgcattatgacagccgtcgtgtatatccccct
gtccagccatatcagcgagaggagattgtccgaggaagccctgtacccattgaaattcca
caagcagctgtaccttcctacgtacctgaatccagagacagataccagcaaacagagggt
tattgcccagtggctccacatctcaatcagatcagaccttcatgccacaggccgcatccc
agcctggacgaacttcaccgacgaaggaaagagatcatggcccagctagaagagaggaag
gtgatttctccacctccttttgcaccgtcaccaaccttgcctcatccttttcattcagag
gagtacttggatgaagacctgaaggtagctgggaaatacaaaggaaatgactatagccag
tactctccctggtcctgtgacaccatcggctcctacattggaaccaaagatgcaaaaccc
aaagatgttgtggcagcaaggagtgtggagatggtgaacgtagatagtaaagccatgcgt
gaccagcgattagacatgcagcgaagagcagcagagactggtgatgatgacctcattcca
tttggagaccgaccaactgtgtcaagatttggggctatctctcgtacttccaaagcgatg
taccagaattctggtcccatgcaggccatggcagttcagggagctaccaccaaatcaatc
atttcagactacaatccttacggaacccacagtggctggggaggctctccatattctcct
catcaaaatataccttctcagggacgtttcaatgacagggagagactgtccatgtcagat
gtggctggtcatgggaaacagttgccctcagcggagcgagagcagcagctgcgcatggag
ctgcagcaagtagaccaccagattagccagcagacacaaatgcgaggactagaggctgtt
agtaacaggctgctgttgcagagggaggcgactaccctggcaggccaaccacagccccca
cccccacctcccaagtggcctggaatgatctcaagtgaacagctgagcttggagctacac
caggtggaaagggaaattgggaagagaacccgtgagctgagcatggagagccagtcttca
ctggatattaaaaacaaactgggcaccactaaacagacagaaaacggacaattagaacca
caaagcaaggttccagctgaggacctcgcactgacattcagcagtgatgttccgaatgga
tcagccttgacacaagagaacattggcctcctgtcaaacaagacggcatctctcagcctg
tcagaggacccagagggaggaggagacaaccacgactcccagagagcgggagttacaccc
acgtctgctccatga
DBGET
integrated database retrieval system
