KEGG   Aptenodytes forsteri (emperor penguin): 103896303
Entry
103896303         CDS       T08527                                 
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
afor  Aptenodytes forsteri (emperor penguin)
Pathway
afor04382  Cornified envelope formation
afor04510  Focal adhesion
afor04512  ECM-receptor interaction
afor04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:afor00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103896303 (COL4A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103896303 (COL4A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103896303 (COL4A1)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    103896303 (COL4A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afor04147]
    103896303 (COL4A1)
   00536 Glycosaminoglycan binding proteins [BR:afor00536]
    103896303 (COL4A1)
Exosome [BR:afor04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   103896303 (COL4A1)
Glycosaminoglycan binding proteins [BR:afor00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103896303 (COL4A1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 103896303
NCBI-ProteinID: XP_019326771
LinkDB
Position
Unknown
AA seq 1615 aa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NT seq 4848 nt   +upstreamnt  +downstreamnt
atgcaaggacctgaaggtcctcctgggccaccggggcttaagggtgatactggagaacca
ggactgccaggaacaaaaggaacgagaggccccccaggagcatcaggctttccaggaaac
ccaggccttcctggcattcctggacaagatggccctcctggtccacctggcattccagga
tgtaatggcacaaagggtgaaagaggtccagtaggtcccccaggtttaccaggactgact
gggagcataggacccccaggacctcctggaatgaagggagatccaggtgaagtgatcggt
cttttacctcctagtgtgctaaaaggtgataaaggctttcctggccaacctggactacct
ggtccacctggaactccagggtttcagggaccaatggggccacaaggtcctccaggagat
ccaggtcccccagggccaccaggactcccaggcgagaagggctacatggggttgggcttt
cagggtcccaaaggtgaaaagggagaacaaggggtaaggggccccccaggccccccagga
ccagcaccacatatgaaagaaaaagggagtgaaatcataaggggagaaaagggtgatcca
ggtgaaaagggtgaacagggagccccaggattgccaggttcaggtttcaaaggagaaaag
ggtgaacctgggaagcctggtccacgtggaaagcctggaaaagatggtgaaccaggacca
aaaggagaacctggtttgcctggtggatttgggattccaggacgagccggggagcctggt
acgaagggtgacaaaggtgaacaaggttttccaggacctccaggaagagttatagatact
ggactagtagatacctttggtgaaaaaggagagcctggagtttcaggtttgcctggactg
aaaggtcaaaaaggtgaaaaaggtttccctggtatacaaggaatcccaggacctccaggt
cgaccgcttcctgacaggataggatcacctggtgtccctggagagagaggtgaaaaaggt
gaaaagggttctccgggattccctttacccggaccccctggaagagatggtttcccaggt
cccccagggttgcctggcccaccaggtcctccaggcaaaacagatggaattgaccaatgc
cagcagggagaacctggtgcaccaggtagtcctggacctccaggaagagatggatttcca
ggagagatgggagagaaaggtgacaaaggtgaatcctgtgccttatgtgataaagtagga
cctcctggacttccaggaccacaagggccaccaggtccagcaggttttccaggacaatcg
ggtttcaagggtgacagaggcttacctggacttgatggccttccaggggtacctgggcca
cccggcactccaggacttatgggcagccctggggcaaaaggagaaccaggagatttttct
tacgattctatcctgaaaggtgaaaagggagatcctggtttcccaggacaaccaggtact
cctggaagagaaggaagaccaggaaaagatggattgccaggtctccagggtccgaaagga
gcatcgggtacagctggcttgaaaggagaacgtggtccccctggccaacctggattccct
ggagtacgtggtgaaagaggctttcctggccctcctgggataggcgctgcagggttaccc
ggtgacaaaggagacagaggctttgctggaaccccaggtttaccaggccttccaggagca
aagggcgaagcaggacgaactgtaccactccctggacctcctggggcggatggccttcct
gggccacctggtttccctggaccccaaggtgacaaagggaatcctgggcttccaggtaga
cccggcctgccaggagaaaaaggtgctgttgggcagccaggtatagggttccctggacct
ccaggacccaaaggtttccaaggtcagcctggctcgcctggtctgccggggactccggga
acccctggcctggatggtttgccaggtgtaccaggcttacaaggtcaaaaaggtgaacct
ggtgtaggtctgcctggccctaagggattgccgggccccccaggcccatctggcatccct
ggagaaaagggaaattcaggactgcctggcttacgtggcgagcaagggtttccgggcata
cctggacagcaaggattcagaggcgaccccggcctcccaggactgcaaggcttgcagggc
cctccaggtgcaccagggctgggcccacagggatcaccgggacccgccgggcagccggga
ccccagggaccaccaggatttcctggaataaaaggagaaaggggcttccctggtatccca
ggtctagatatgccaggaccaaaaggggataaaggtagccagggccagcccggagtacca
gggtctgtggggttacccggcctgccaggtccgcagggggccgttggactgaaaggatcg
gcaggaaccaaaggggaaatgggagttatgggaactcctggtttgccaggaactcctgga
ccaattggagatcgagggttgcctggtgaaaaaggtagccaaggtttcaaaggtgtaatt
ggaccacagggtgatcctggtgtcaaaggagataaaggtgaagccggtctcccaggaaaa
cctggaacgatggacaatatggacatggttagtcttaaaggccaaaagggagatcaagga
gaaaaaggggaccatggagcaacaggagaaaaagggttacgtggggaatatggagaacca
ggaattccagggagggatggtgaccctggtactccaggacatccaggaccaaaaggtgat
cagggccccccagggtacccaggagatccaggaattccaggacaaaaaggatcggttggt
gaaatgggtttgccaggaacacctggagaaaagggtctgccgggagtaccaggttcacca
ggcacaccagggttccctgggcaaaaaggtgaaaaaggagacaaaggagcaccaggtttt
cctggaattggctttccagggtctcctggtgagaagggagaaccaggaagaacgggtagt
ccaggtttatctggagataagggtgaaaagggtagtgcaggaattcctggaatgccgggt
gccccaggtcccaaaggatccgctggcatggcaggatttccagggagccccggccgccat
ggagaaaagggtgaaaaaggacttcctggcttaagtggcattccaggtttaaaaggagaa
ccaggtgaacctggcgttccgggtcctgctggttccattggacagaaaggtgaaccaggt
tatgatgggattccaggtgcagctggtgcaaagggtgaacaaggtattccaggtagagga
cttccaggatttcccggtgcaaagggagataaaggtgcgaaaggtgatgtgggttttcca
ggatccccaggaagtccggggatcccaggcctgaaaggagaaccaggatatgctggtcca
ccaggccctaagggcagccaaggtcttcctggactaccaggaagtgcaattgagggccct
aaaggagacagaggaccccaaggccaacctggccttccaggtttaccaggtccaacaggg
ccaccaggacccccaggtctgaaaggggccaaaggagagcagggaagcaatggctggcct
gggactcctgggggtcagggagtcaaaggcgatccgggtttccagggactgccaggtagt
cctggtttaccaggagatattggtcaaaagggtgatctgggacctccaggagttccaggc
gttccaggtccaaaaggatcttctggcttcccaggccttaagggtgagcgaggtgaccaa
ggtcttcctggatctaaaggtttacaaggcccaccaggcccaccaggtgcttttcagctt
gttaaaggggatcctggcttacctggccctgtaggaccggttggtctcaaaggattccca
ggacatccaggtcccaaaggacagcaaggggtgacaggaccttcaggtgtacctggacca
cctggtagtccagggtttgatggtaaacctgggcaaaaaggagaagttggtccttatggt
cccccagggcccagaggattccctggtccgcctggccctgaaggtttgcctggggctatg
ggcccaccaggtgcaccgtctgttgctcatggcttccttgttaccagacacagtcaaacc
actgaagaaccatcatgtccatttggaacaaggctgatttaccatggctactccttgctt
tacgtacaaggcaatgaaagagcacatggccaagatctgggcacggcaggaagctgtctt
cgtaaatttagtaccatgcctttcttattctgcaatatcaacaacgtatgtaactttgca
tcaaggaatgactattcctactggctgtccacgcctgaacccatgccaatgagtatggct
cctatcactggtgataatatcagaccattcatcagcagatgctctgtgtgtgaagctcct
gctatggtaatagccgttcacagtcaaacgattcaaataccaccgtgtcctgaaggctgg
agttcactttggattggttactcctttgtcatgcacaccagtgctggtgcggagggctct
ggccaggccctggcgtctcctggttcctgcctagaggagtttcgcagcgctcccttcatt
gaatgccatggccggggcacctgcaattattatgcaaatgcttacagcttctggcttgcc
actatagagaggaatgagatgttcaagaaaccgactccctcaactttgaaagcaggggat
ctgcgctcaaatgttagccgttgtcaagtctgtatgagaaaaacataa

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