KEGG   Aptenodytes forsteri (emperor penguin): 103896486
Entry
103896486         CDS       T08527                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
afor  Aptenodytes forsteri (emperor penguin)
Pathway
afor03030  DNA replication
afor03410  Base excision repair
afor03420  Nucleotide excision repair
afor03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:afor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103896486 (RFC5)
   03410 Base excision repair
    103896486 (RFC5)
   03420 Nucleotide excision repair
    103896486 (RFC5)
   03430 Mismatch repair
    103896486 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:afor03032]
    103896486 (RFC5)
   03036 Chromosome and associated proteins [BR:afor03036]
    103896486 (RFC5)
   03400 DNA repair and recombination proteins [BR:afor03400]
    103896486 (RFC5)
DNA replication proteins [BR:afor03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103896486 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    103896486 (RFC5)
Chromosome and associated proteins [BR:afor03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    103896486 (RFC5)
DNA repair and recombination proteins [BR:afor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103896486 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    103896486 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 AAA_16 AAA_24 AAA_22 AAA_11 AAA_assoc_2 AAA_14 DEAD ResIII RuvB_N DUF815 AAA_5 AAA_30 AAA_19 PhoH DNAX_ATPase_lid TIP49 AAA_7 TniB ATPase_2 nSTAND3 Mg_chelatase Thioredoxin_6 bpMoxR Hydantoinase_B NPHP3_N Gp44_lid AAA_28
Other DBs
NCBI-GeneID: 103896486
NCBI-ProteinID: XP_019326824
LinkDB
Position
Unknown
AA seq 320 aa
CRVEKYRPQALSELVSHRDILSTVQRFISEDRLPHLLLYGPPGTGKTSTILACAKQLYRE
REFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQNALRR
VIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLRHVIQEEGVDVTED
GMKALVTLSNGDMRRALNILQSTTMAFGKVTEENVYTCTGHPLKSDIANILDWMLNQDFS
TAYRKITELKTLKGLALQDILTEIHLFVHRVDFPPSVRIQLLIKMADIEYRLAAGTSEKI
QLSSLIAAFQVTRDLIVAEA
NT seq 963 nt   +upstreamnt  +downstreamnt
tgcagggtggagaagtaccggccgcaagcgctgtcggagctggtgtctcaccgggatatc
ctcagcaccgtgcagcggttcatcagcgaggatcggctcccgcatcttctcctctacggt
cctcccggtaccggtaagacctccaccatcctcgcttgcgccaagcagctctaccgggag
cgggagtttggttccatggtgctggagctcaacgcctccgatgaccggggtatcgacatc
gtccgaggccccatcctgagcttcgccagcaccaggaccatctttaagaaaggcttcaag
ctcgtcatcctggatgaagctgacgccatgacccaggatgctcagaacgccctgaggcga
gtgatcgagaagttcacggaaaacacccgcttttgcctcatctgcaactacctctccaag
atcatccccgccttgcagtcccgctgcacacgcttccgcttcggccccctcacaccggag
ctgatggtgccccggctgcggcacgtcatacaggaggagggggtggatgtgactgaggat
gggatgaaggctctggttaccctctcgaacggtgacatgcgcagggccctcaatatcttg
cagagcaccaccatggcctttgggaaggtgacggaggagaacgtctacacctgcacggga
caccccctcaagtctgacattgccaacatccttgactggatgctgaaccaggacttttcc
accgcctatcgcaaaatcacggagctgaagacgctgaagggcttggccctgcaggacatc
ctcaccgagatccacctgtttgtgcacagagttgatttcccgccctcggtccgcattcag
ctactgatcaaaatggcagacatcgagtaccggctggctgctgggaccagtgaaaagatt
cagctgagctccctcatcgcggctttccaagtcaccagggacctgattgtggccgaagcc
tga

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