Aptenodytes forsteri (emperor penguin): 103897141
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Entry
103897141 CDS
T08527
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1
KO
K10864
DNA mismatch repair protein PMS1
Organism
afor
Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afor03400
]
103897141 (PMS1)
DNA repair and recombination proteins [BR:
afor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
103897141 (PMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_WDHD1
HMG_box_5
CHDNT
Motif
Other DBs
NCBI-GeneID:
103897141
NCBI-ProteinID:
XP_009275390
LinkDB
All DBs
Position
Unknown
AA seq
933 aa
AA seq
DB search
MKQLSADTIRLLSSSQVITSVVSVVKELIENSLDASATNIDIKLENYGFNKIEVRDNGNG
IKVADVPVMAIKHYTSKISSSEDLERLTTYGFRGEALGSICCISEVLITTKTAADDFSTQ
YALDSNGHITSKKPSHLGQGTTVTVLKLFKNLPVRKQFYSTNRKCKEELKKVQDLLTAYG
IIKPDLRVTLTHNKAVIWQKTRVSDHKMACMSVLGTAVMGSMVPFQHCCEDPEINLSGFL
PKAESDSSLTSLSSSERSFVFINNRPVHQKEILKLIRQYYSLVTHKDCTRLYPVFFLNIT
VPASAVDVNLTPDKTQVLLHYKESVLLAVENVLKSLYGPLPATVPGESNKTDVTSEDMFV
HRTEQTDVVVNEMGPSGNDDLRAHTSFLSFSSDVQNCQAGKNTEICLNHQTFCGDNVHSR
LDKKEVSKSDAFPDSSLNLLCEKEQNGQNMTDIQSNSVPVDPKSKKADEHPLSSDNIDEI
EKIEEALVPKDLPEISADNWSMGSGFKDRLGDNLEPVKILIPEVGGTINKQNEHTGEQSD
DSQISNQSVKKRNVISDKFGHVTAYDLISSRIIRKPKSAIGFFTQECRPKLVTDNPKTSM
EDILLKIEEQWKNLNEEEKRNYEVKAAKDLERYNREVKKAMGQTVPRPTKEAEKQKPKLK
TSPSDQQKLDKIFHAQIEKKRKPEQPMKIVTVPFSLSSCRHQLQRHKKNDSDEHELFLIR
RQSFPDVWIFATEKKLMLLNPYRLEEALLCKRLLMNHKLPVEKLDKSIVLTDSLTGGSQY
MAALYKMQKDYQRFNGSGYLSDPRLVANGFQIKVIEGASATESHLEIEGIANCLPYYGIS
DLKEILNAVVNGNAKEVYECRPLKVINYLEGEAVRLARQLPLHLSKEDVQNTIYRMKQQL
GKENKGCVHGRPFFHHLTDIPEADKHNSTEIIQ
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagctgtcggcagacactattcgtctcctttcaagttctcaggtgattacgtca
gttgtcagcgtggtgaaggagctgatagaaaattccttggatgccagtgccacaaatatt
gacattaaactggagaattacggatttaacaaaatagaagtaagagacaatggcaatgga
atcaaggttgctgatgttccggttatggcaattaaacactacacctcaaaaataagctct
tctgaggaccttgaaaggttgacaacatacggtttccgtggggaggctttgggatcaatt
tgctgcatatcagaggttttgatcacaacaaagacagctgctgatgatttcagcactcag
tatgctttggatagtaatgggcatataacttctaaaaaaccttcccatcttgggcaaggt
actacagtaacagtcctaaagttgtttaagaatcttcctgtaagaaagcagttttactca
acaaatagaaaatgtaaggaagaactgaaaaaagtccaagatctactgacagcatatggt
atcataaaaccagacctgagggtaaccttaacacataataaggcagttatttggcagaag
accagggtgtcagatcacaaaatggcctgtatgtcagttctgggaacagccgttatgggc
agtatggtaccttttcaacactgctgtgaagatcctgagataaatctttctggatttctc
ccaaaagctgagtcagacagttctttgacaagcctttcaagttcagaaaggagttttgtt
tttataaataatcgtccagttcatcagaaggaaatactgaagttaattcgacagtactac
agtctggtgacgcacaaggactgtactcgtttatatcctgttttctttttgaatattact
gtacctgcctctgctgtggatgtgaatttaacacctgataaaactcaagttttactgcat
tataaggaatctgtcttacttgctgttgaaaatgtgttgaaatcactgtatgggccacta
cctgctacagtccctggtgaaagtaataaaacagatgttacctcagaagacatgtttgtt
catagaacagaacaaacagatgtggttgttaatgaaatgggaccatctggaaacgatgat
ctacgtgctcatacttcattcctttcattcagcagtgatgtgcaaaactgtcaagcagga
aaaaacacagagatctgcttaaatcatcagacgttttgtggtgataatgtacatagtcgc
ctggacaaaaaagaggtttctaagagtgatgcctttccagacagttccttaaatttattg
tgtgagaaggaacagaatggacagaatatgaccgatattcaaagtaacagtgttcccgtg
gaccccaagtctaaaaaagctgatgagcatcctttgagttctgataatattgacgaaata
gaaaaaattgaggaagccttagtccctaaagacttacctgaaatctctgctgataattgg
agtatgggaagtggatttaaagaccgtctaggagacaacctggaacctgttaagattttg
attcctgaagttggaggaacaattaataagcaaaatgaacatactggtgaacaaagcgat
gattcacaaatctcaaatcaaagcgtaaagaaaagaaatgtgataagtgataaattcggt
cacgtgacggcttatgacttaattagtagtagaataataaggaaaccgaagtctgcaatt
ggatttttcactcaagaatgtcgtccaaaattggtaactgataatccaaagaccagcatg
gaggacatcctgctgaaaattgaagagcagtggaagaatttgaacgaagaggaaaaaaga
aattatgaagtaaaagctgctaaagacctggaacggtacaacagagaggtcaagaaagct
atgggacagacagtgccccgaccaacaaaggaggcagaaaaacagaaacccaagctgaag
acttccccatcagaccagcagaagcttgacaagatatttcatgctcaaattgaaaagaag
cggaaacctgaacagcctatgaaaattgtgacagtgcctttttctctgagttcctgtaga
catcagcttcagagacacaagaaaaatgattcagatgaacacgagcttttcctgatccgt
cgtcagagttttcctgatgtctggatatttgctactgaaaaaaagctaatgttgctgaat
ccatatagattggaagaagccctgctatgtaaaagattattgatgaatcataagcttcca
gtagagaaactggacaagtcaattgtgttaacagacagtcttactggtggatctcagtat
atggctgctctttataaaatgcagaaggattaccagcgtttcaatggatcaggttatttg
tcagatccaaggcttgtagcaaatggattccagataaaagtgatagaaggtgcttcagct
acagaaagtcatctggaaatagaagggatcgcaaattgtctgccatattatggtatttct
gatttgaaagaaattttgaatgcagtagttaatggaaatgcaaaggaagtatatgaatgt
agacctctcaaagtaataaattacttggagggagaagcagtacgtttagctcggcagctg
cccttacatttgtcaaaagaagatgtacaaaacaccatttacaggatgaagcaacagctt
ggaaaggaaaataaaggctgtgttcatggtcgtcctttttttcatcacttaacagatatt
ccagaagctgacaagcacaactccacggaaattattcagtaa
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