Aptenodytes forsteri (emperor penguin): 103897912
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Entry
103897912 CDS
T08527
Symbol
TRUB1
Name
(RefSeq) LOW QUALITY PROTEIN: probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
afor
Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afor03016
]
103897912 (TRUB1)
Enzymes [BR:
afor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
103897912 (TRUB1)
Transfer RNA biogenesis [BR:
afor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103897912 (TRUB1)
Prokaryotic type
103897912 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Pus10_C
Motif
Other DBs
NCBI-GeneID:
103897912
NCBI-ProteinID:
XP_019327193
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
GVVLGKSADKLFSLSGLFAVYKPKGPTSAGARNLLKERLLAEAGVQTNGNKRNQVLKIGH
GGTLDSAAAGVLVVGIGKGTKMLRTMLAGSKKYTAIGLLGKATDTLDATGKVTEEKPYDQ
ITKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVRVYSLSLQ
QFQPPLFTLDVECGGGFYVRSLVSDIGKELSTCATMQELTRTKHGPFTLEEHTLYEDKWT
IDEIARTLQHCTSLLPGEPSHKKLKTEHPGETAVSCKISDKLGQGKRLND
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ggcgtcgtgctcggcaagtccgccgataaactcttctctctgagcgggctgttcgcggta
tacaagcccaaggggcccacctcggccggcgcgcgcaacctcctgaaggagagactgctg
gcagaagctggtgtgcaaacaaatgggaacaaaagaaaccaggttttgaaaattggacat
ggtggaactttggacagtgcagcggcaggagttcttgtggttggtattggaaaaggaaca
aaaatgctgagaactatgttggcaggttccaagaagtacactgccatcggactactgggc
aaagctactgatacattagatgctacaggaaaagtaactgaagaaaaaccttatgaccag
ataacaaaaggagatcttgaaaatgtgctgcaaaagttcacaggggacataatgcaggtt
cctccactctattctgctttgaagaaggatggagaaaggctatcaactctgatgaagaga
ggagaagcagttgaagcaaaacctgctcggccagtaagagtgtacagcctctctctccaa
cagttccagccaccactgttcacactggacgttgaatgtggtggtggcttttatgtcagg
agcctggtcagtgacattggcaaagaactctctacctgtgccactatgcaagagctgacc
cgaaccaaacatgggccatttacgctagaggagcataccctttatgaagacaaatggaca
attgatgaaattgcacgaaccttacagcattgcacgtctcttctcccgggagagccgtct
cataaaaaattgaagacagagcatcctggtgaaactgctgtgagctgtaagataagtgat
aagttgggtcaaggaaaaagactgaatgattga
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