Aptenodytes forsteri (emperor penguin): 103898034
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Entry
103898034 CDS
T08527
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
afor
Aptenodytes forsteri (emperor penguin)
Pathway
afor03440
Homologous recombination
afor03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103898034 (BRIP1)
03460 Fanconi anemia pathway
103898034 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afor03400
]
103898034 (BRIP1)
Enzymes [BR:
afor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103898034 (BRIP1)
DNA repair and recombination proteins [BR:
afor03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103898034 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
103898034 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-GeneID:
103898034
NCBI-ProteinID:
XP_009276502
UniProt:
A0A087R033
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MSSDVSEYTIGGVKIIFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSA
LSWQQSLYEKSLLTSSCEKKDKKPETSPPCRCLCHSQCKSNEAATSVNHGASCSSNNYET
GSSIKPGSPLTNTERKENETLASKLSAKKRLSLCDNENDDFQVDRKRIRPLETEQQVRKR
HCFAKGVQLVDALEVYHQRKNGELIVHSEKSVKTTTFSPKTSSGPCTECSCSSGKETDKD
ASNTKKKENGDRSFIPKIFFGTRTHKQISQITRELKRTAYSSVPMTILSSRDYTCIHPVV
SSSGSNRNEMCVELLEGKHGKSCLYYHGVHKLSEHHALQSAHRMYQAWDIEDLVSLGKKL
RACAYFAARELMVGADIVFCPYNYLLDPQIRESMEINLKGQVVILDEAHNIEDSARESVS
YSVTESQLRAAREELDFMVNNNIRQKDHKPLQAVCCSLTNWLQESSSQLVERGYETSCKV
WSGKEMLTILHKMGITAITFPILQKHLATVLEKEEKISVLGKEELIEIPIVSPATQIVLK
GLFMVLLCLFKDNSRYADDYRVALQETYAWMNENQLDVSDTSAFFTRPKRKRSLRQKTIV
HMLNFWCLNPAVAFSDLNDVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVW
VGTIGAGPNGRKLCATFQHTEAFEFQDEVGALLLSVCQKVGQGILCFLPSYKLLDKLKDR
WMHTGLWRNLELVKTVVAEPQGGAKSDFDELLKIYYDAIKCKGEKDGALLIAVCRGKVSE
GLDFCDENARAVITIGIPFPNVKDLQVELKRKYNDQYKNTRGLLPGSQWYEIQAYRALNQ
ALGRCIRHRNDWGALILVDDRFRNNPNKYITGLSPWIRQQIQHHENFHSALESLHAFAIR
NQKSIDCSSECSSEFLHVPSNSKDLSQASQREATIHLSPDVPAKSEEQNLVSEINFTTTI
SSVNPTASNQPSGQKVDVESHSHHVTQRRKHMDSTPKTPATEIEREKKSGWTNADIMKEH
CCFKPLTSTPLPVAKNCMSTASSKQKNMNRASELIDRVNQCQSSLISEHKPSVPESCLET
TNFSVKNTEAPVAEEHPDKLQLQVEPCSEFPSAGGKSELSMLNVSAETEDEDDSIYFTPE
LYDDVESEEQKIRPLVPTGNTNENRIECGNSTVTDDLCAINTSETLSVTKKMIDDDGRNT
SLHGIMQNEGSKNNAVNNVEMTSEIEAEQIASQEMDTTKRKINLSRSRNKGVSSFLLKNT
ST
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgatgtgtcagaatatactattgggggagtgaagatcatattcccttgcaag
gcttacccttcacaacttgctatgatgaatgctattgttaagggcttaaataacaggcaa
cactgtttgttggagagccctacaggaagtggcaaaagcttggcattactttgttctgca
ttatcatggcagcagtctctgtatgagaaatcactgcttacatcgtcatgtgaaaagaaa
gacaaaaagccagagacctcaccgccatgtcgctgtttgtgtcattcccaatgtaagagc
aacgaggctgcaacaagtgtgaatcacggtgcttcttgttcttctaataattatgaaact
ggaagttccataaaacctggaagcccgctaacaaatacagaacgtaaggaaaatgaaacg
ctagcttcaaaattgtctgccaaaaaaaggttatctctatgtgacaatgagaatgatgat
tttcaagtagacaggaaaaggattcgtcctttagagactgagcagcaggttagaaaacgt
cattgttttgcgaaaggagtgcagctagttgatgctttagaagtttatcatcagagaaaa
aatggagagctgattgttcactctgaaaaaagtgtgaaaaccactactttttctcccaaa
acatcttctggtccttgcactgagtgttcctgttcttctggaaaagaaactgataaagat
gctagtaacacaaagaagaaggaaaatggagatcggtcgttcattcccaaaatatttttt
ggaacacgaacacacaagcaaatatcccagattaccagagagttgaagagaacagcgtat
tccagtgtccctatgacaattctttctagccgggattatacctgtattcatccagtggta
tctagtagtggtagtaacaggaacgaaatgtgtgtagaattgctggaaggaaaacatggc
aagtcctgtctttactatcatggtgttcacaaactcagtgaacaccacgccctacagtct
gcccataggatgtatcaggcttgggacattgaagatctagtgagcctgggaaagaagctt
cgtgcctgtgcatattttgcagccagagaactcatggtgggcgcagatattgtattttgt
ccttacaattatctcctagacccgcagatacgggagagcatggaaattaacctaaaaggc
caagtagtcattttagatgaagcccataatattgaggactctgctcgggagtcagtgagc
tacagtgttacagaaagtcaactaagagctgctcgagaagagctagatttcatggtcaat
aacaacatcaggcagaaggatcataagcccctacaggctgtgtgctgctctttgacaaac
tggttacaggagagctctagtcaactggtagaaagagggtatgaaacttcctgtaaggtt
tggagtggaaaagaaatgctcaccattttgcacaaaatgggaataactgctattactttt
cccattttacagaaacatcttgctactgtcctggaaaaagaagaaaaaatatcagtgctc
ggtaaagaggaacttattgagataccgattgtgagccctgccactcagattgtgctgaaa
gggttattcatggttcttttatgtctttttaaagataatagcaggtatgcagatgactac
agagttgctctacaagaaacttacgcttggatgaatgaaaaccaacttgatgtttcagat
acaagtgccttctttacacggcccaagcgtaaaaggagtttgcggcagaaaaccatagtc
cacatgcttaatttttggtgcttgaatcctgctgtggctttttcagacttaaatgatgtt
agaacaattgttctgacatctggcacgctctctccaatggattcattttcttcagagctt
ggcgtgaagttttctattcagttggaggcaaatcacgttattcggaactcacaggtttgg
gttggcaccattggagcaggccctaatggtcggaagctgtgtgccacgttccagcacaca
gaggcctttgagttccaagatgaggtgggagcacttctgctttcagtgtgtcaaaaagtt
ggtcaaggaattttgtgctttttgccatcctataagctgttggacaaattaaaagatcgc
tggatgcacactggcttatggagaaacctggagctggttaagacagtcgttgcagagcca
caaggaggggcaaagagtgactttgatgaactgctgaaaatatactatgatgcaataaaa
tgtaaaggagaaaaagatggagcactccttatagctgtatgcagaggaaaagttagtgaa
ggcttggatttctgtgatgagaatgcccgtgcagttataaccataggtattccattccca
aatgtgaaagaccttcaggttgaattaaagaggaagtacaatgaccagtacaaaaataca
agaggccttttaccagggagtcagtggtatgaaattcaagcttatagggctctgaaccaa
gctctgggaaggtgtataagacataggaatgactggggtgctcttattttagttgatgac
cgcttccggaataaccctaataagtacataactggattatctccatggattcgtcaacaa
atccagcaccatgaaaattttcatagtgcacttgaatccttgcatgcatttgctataaga
aaccagaaaagcattgattgttcatcagagtgcagcagtgaatttctccatgtaccttca
aattcaaaagacctatcacaagcctctcaacgggaggcaactattcatctgtcaccagat
gttcctgctaaaagtgaggagcaaaatttggtttcagaaattaattttactacaacaatc
agctcagttaatcctacagcatcaaatcagccgagtggccagaaagttgatgtagagagt
cattctcaccatgtaacacaaagaagaaaacatatggactccacacccaaaacaccagca
actgaaatagagagagaaaaaaagagtggttggactaatgctgatattatgaaagaacat
tgctgctttaaaccactgacttcaacacctttgcctgtagccaagaactgcatgtccaca
gctagtagcaaacaaaagaatatgaatagggctagtgaacttattgatagagtaaatcaa
tgtcagtcatcattaatttcagaacataaaccaagtgtaccagaatcatgtttggaaaca
actaatttttcagttaaaaatactgaggctccagttgctgaagagcatcctgataagctg
cagcttcaagttgagccctgcagtgagtttccttcagcaggagggaaatctgaactttca
atgttaaatgtatctgcagaaactgaagatgaggatgacagtatctacttcacaccagaa
ctctatgatgatgtagaatcagaggaacagaaaatcagaccgctggttccaaccggtaac
acaaatgagaatcggattgaatgtggaaactccacagtcactgatgacctttgtgcaatc
aacacctcagaaacattaagtgtgactaaaaaaatgattgatgatgatggcagaaacaca
agtttacatggaataatgcaaaatgaggggagtaagaataatgcagttaataatgtagaa
atgactagtgaaatagaagcagagcagatagcatctcaagagatggacaccacaaaacgg
aaaatcaatctttccagatcacgaaataaaggtgtgtcatcctttctattgaaaaatact
agcacatag
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integrated database retrieval system
