Aptenodytes forsteri (emperor penguin): 103899629
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Entry
103899629 CDS
T08527
Symbol
LIMCH1
Name
(RefSeq) LIM and calponin homology domains-containing protein 1 isoform X5
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
afor
Aptenodytes forsteri (emperor penguin)
Brite
KEGG Orthology (KO) [BR:
afor00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
afor04990
]
103899629 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:
afor04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
103899629 (LIMCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
LIM
Motif
Other DBs
NCBI-GeneID:
103899629
NCBI-ProteinID:
XP_009278405
LinkDB
All DBs
Position
Unknown
AA seq
1586 aa
AA seq
DB search
MRKETEDIESPKRSIRDSGYIDCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSQQTPSPD
VVLRGSSDGRGSDSETDLPHRKMPDVKKDDMLARRTSHGEPKSAVPFNQYLPNKSNQTFY
VPAPLRKKKAEREEYRKSWSTATSPLGDRPFSKPHPETIEEEQNETSGLCEKEKVGSLAP
EASSLKNQVGLNQNEGNSIDQSPSCSAKETSAPKGKDAEEIKKLRRLEQAGIKVMSAAQR
YGSKKPTCEDNGSTPDIILRRDNPFMTHYQGKDSGSEDEAASRVPDLEKDDFATRRARMN
QPKHIVPFNPFLIGPYTSKDKGKLEDIKKPLQMEKQEHARRRRVHMASTRQIVTSKENPL
LQTEKTESEEEQQVKVPDTESDDLAKQKSQSTLPQLREDAIFVNASITKADLETWKRLKL
SGEPSEEDFKCPSDTLPPAEITVKAAAHDDFAVRKARANKKAGSPKQKFVHFGPVTEIDQ
QKWDKLVIGRASSKNGTEEESKKDSVENHSAVESSLSTTVGSLGFAEHSDEVSKPQNESS
EVATSGTDDSCRRMLSPVPAFGIVSEKQTLCSLNKRQEGTEEDCVGHLPDIERDDMLVRR
MGTFQRRTTSPVPIHCPPLSVAPHLLQQRQGEAVACEKDLKTPWEAESTVTREESQEQPE
IPQQQSGGTENEVKFPDPQRDDMLARRTGAFLKQPGPSVKQFLPMPFSKQQNKQGTARDL
EKKNTRPEKSPQVCINSSGKPVVQPPQEQQQGQEKCNLPPAGQDETICTAQVGEGSLNEV
HLGQMSKLQEVPEENKTETLSSKDEHLQTFGPRTAVSDDAESMSMFDMRCEEEAVTQPHS
KARHEKLQNVHNQLKEDETRWQDDLARWKSRRRSASQDLIKKEAERKKMERLLSGDGTNE
RRKSIKTYREIVEEKERRERELHEAYKNAKSQEEAESILQQYIERFTISEAVLERLQMPK
ILERSHSVEPNSPLKDPNPLRYLRQQSLPAPKFTATVEATIVPTTEIEPSGSAGRTSPSK
SIVSKAVPMLTPKPYSQPKNTQEVLKNFKVDGKVSMNGENFNGVEEKDKECTTVILTPSP
SRSLKFDGVARGDRPPVELKKDPTSVELSLQRPATQSVHKEPTASLVEADRAASKQVEAS
PGSAGPVSPVCPCPGSDQKQFKSTAACASPVVKRLEFLPSPFPSEEAASSEKDVKKPEME
QQKEAELPAAPEVMKPKALEQEGSVVLPFLKKLPETSQVTLQNSGLQADSDSGDKSNRFN
FWSWDPEEERKRQERWQHEQERLLQEKYQKEQDKLKEEWEKAQREVEEEERRYYEEERKI
IEDTVVPFIVSSNSAELLSSSSSTTEGNKTANTTDSNSSPEEVKQKEVTRQKKLLWEQDS
IPSPKSKENELWQEKRSGNKVLSGHPEMGILKGGEQEHQVPEMEHSSPARLNLPLTQDVS
WNQQLLTKQSPHRAEDIRQRPFLSQSAGQQPSSAGETRRAGYHENFQSGPSSPCSPAAPS
QSPNRYKRSVSGKKLCSTCGLPLGKGAAMIIETLGLYFHIQCFRCGICKGQLGDAASGTD
VRIRNGLLNCTDCYIRSRTAGQPTTL
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggaaacggaggatattgagagcccaaagcgcagcattcgtgacagcggctat
atagactgctgggactctgaacgcagcgattccctctccccgcctcgccacggcagagat
gattcctttgacagtctggactcctttggctcccgctcgcagcagacaccgtctccagat
gtagtgctcagagggagcagcgatgggagaggaagtgactcggaaactgacctgccacac
agaaagatgccagatgtgaaaaaagatgatatgttggcgaggcggacctcacatggtgaa
cctaaatcagctgtgccttttaaccagtacctccctaacaagagtaatcagactttctat
gtacctgctccacttcggaaaaagaaagctgaacgagaagagtaccgaaagagctggagc
acggcgacttcaccactaggagacagacctttcagcaaaccccaccctgaaaccatagaa
gaagaacagaatgaaacatcaggactgtgtgaaaaggagaaagtgggctccctggctcct
gaggcaagctcccttaaaaatcaagtaggtttgaatcaaaacgaaggaaactccatagac
cagtctccttcatgtagtgcaaaagaaacatcagcacccaaggggaaagatgcagaagag
atcaaaaagttaagaagactcgaacaagctggcattaaggtcatgtcagcagcccagcgc
tatggcagtaaaaagccaacatgtgaagacaacggaagcaccccagacatcatccttcgc
agggacaaccccttcatgacacattaccaagggaaggattctggttcagaagatgaagca
gccagcagagttcctgatttagaaaaggatgactttgccacccggagagccagaatgaat
caacccaaacacatagttccgtttaacccctttttaattggaccctatacaagtaaagat
aaaggtaaactggaagacattaaaaagccattgcagatggaaaagcaggaacatgcaaga
agaagacgggtgcatatggcatcaacaaggcaaatagtgacaagcaaagagaacccactt
ctgcaaactgagaagactgagtcagaggaggaacagcaggtgaaagtgccagatactgag
agcgatgatttggctaaacagaaatctcaaagtacccttcctcagctacgagaagatgcg
atttttgtgaatgcctctataacaaaagcagatctggagacctggaaaagattgaaactg
tcaggggagcccagtgaagaagatttcaaatgtcccagtgacactctgccaccagctgaa
atcacggtgaaagcagcggcccacgatgattttgctgtccgcaaagccagagcaaacaaa
aaggctggtagccccaagcagaagtttgtgcattttgggccagtaactgagattgatcaa
cagaaatgggacaagctcgttattggcagagcttcatccaaaaatggaacagaagaggaa
agcaagaaagacagtgtggagaatcactctgctgttgaaagctctctttcaaccactgtt
ggcagtctcgggttcgctgaacacagcgatgaagtatctaagccacagaatgaatccagt
gaggtagccacgtcaggtacagatgactcttgcaggagaatgctatcacctgtcccggct
tttggcatcgtctctgagaaacaaaccctgtgcagtttgaacaaacggcaagaaggcacc
gaggaagactgcgtcgggcatttaccagacattgagagagatgatatgttggttagaagg
atgggaacttttcagaggcgtaccactagccctgttcccatacattgtcctcccctgtca
gtagctcctcatctgctgcagcagcggcaaggggaggcagtagcttgtgagaaggatttg
aagactccatgggaagcagaaagtactgtcacacgagaagagagccaagaacagcctgaa
atccctcagcagcagagcggtggaacagaaaacgaagtgaaatttccagacccgcaaaga
gatgacatgttggccagaagaactggagctttcctaaaacagcctgggcccagtgttaag
cagttccttcccatgccattttcaaagcagcagaataagcagggcacagctagagatctt
gagaagaaaaatacgaggcctgaaaagtctccacaagtctgcattaatagctctggaaaa
cctgtagtacaaccgccgcaagaacagcagcaagggcaggaaaaatgcaatctccctcct
gcaggacaagatgagactatttgtactgcccaagtgggtgaaggtagccttaatgaagtc
caccttggtcaaatgtctaagcttcaggaggttcctgaggaaaacaaaacggaaacattg
tcatccaaggatgagcatctgcaaacattcggccccagaactgctgtgtctgatgacgca
gagagtatgagcatgtttgacatgagatgtgaagaagaagctgtgactcagcctcatagc
aaagctcgccatgagaaactgcagaacgtacacaaccagctgaaagaggatgagaccaga
tggcaagatgacctggctcggtggaagagtcgtcgaaggagcgcttcacaggatttaata
aaaaaagaagctgaaaggaagaaaatggaaaggttattgtctggagatggaacgaatgag
cgcagaaaaagcatcaaaacctaccgagaaattgtggaagagaaagagagaagagagcgg
gagcttcatgaggcatacaagaatgcaaagtcacaagaggaggctgaaagcatcctccag
cagtacatcgaaagattcactatcagtgaagctgtccttgagcgtttgcagatgccaaaa
attctggaaagaagccattcagtggagccaaattccccactgaaagacccaaatcctctg
agatatttaaggcaacagtcactgcctgctccaaaattcactgccaccgttgaagcaact
attgttcccaccactgaaatagagcccagtggttcggcgggccgcacatctcccagcaaa
agcattgtctccaaggctgtgcctatgctgacacccaagccttactcacaacccaaaaat
acacaggaagttttaaagaactttaaggtagatggaaaagtcagcatgaatggagaaaat
ttcaacggtgtggaagagaaggataaagagtgtacaacagtaatacttactccttcgcca
agcagatctctgaaatttgacggagtagccagaggggacaggcccccggtagagttgaag
aaggaccccacaagtgttgagctcagtttacagaggcctgccactcagagtgtgcacaaa
gagccaacagcctcactggtggaagcagatagagctgccagcaaacaggtcgaggctagc
cctggaagtgcaggacctgtgagcccggtgtgcccgtgcccaggttcagatcaaaagcaa
ttcaagtcaactgcagcttgtgccagccctgttgtgaagagattagaatttcttcccagt
ccgttcccttcagaggaagctgcttcaagtgagaaagatgtgaagaaacctgaaatggag
cagcagaaggaagcagagcttcctgctgcaccggaggtgatgaaaccaaaagccctggaa
caagaggggagtgtagtattgccatttttaaagaaactacccgagaccagccaagttact
ctgcagaattctggtctacaagctgattctgatagtggtgacaaatcaaatcgtttcaat
ttctggtcctgggatccagaagaagagcgaaagcgtcaggaaaggtggcagcatgagcaa
gaacgcttgcttcaggagaagtatcagaaggagcaggacaagctgaaagaggaatgggaa
aaggcccagagagaagttgaagaggaggagcgtagatactatgaggaggaacgtaagata
attgaggatactgtagttccattcattgtttcttcaaactctgctgagctcctctcctcc
tcttcctctaccactgaaggaaacaagacagcgaacacaactgattcaaacagctctcca
gaggaagtcaaacaaaaagaagttacaaggcagaaaaagttgctctgggagcaggacagt
ataccatctccgaaaagcaaggaaaatgaactctggcaagaaaagaggagtggaaataaa
gtgctctcaggacacccggagatgggtatcttgaaaggaggtgaacaggagcaccaggtg
ccagagatggagcacagctcgcctgccaggctgaatctgccgttgactcaggacgtctcc
tggaatcagcagttgctgacaaagcagtccccacatcgtgcagaggacattcggcagaga
ccattcctgagccagagtgcgggacaacagccgagctccgcaggagaaacgaggagggca
ggctatcatgagaacttccaatctgggccatcatctccctgctctcctgctgctccgagt
cagtcacccaacaggtacaaaaggtctgtcagtggaaagaagctttgttctacctgtggg
cttcctcttgggaaaggagctgccatgattattgaaacgcttggtctttatttccatatt
cagtgcttcaggtgtggcatttgcaagggacagctgggagacgcagcaagcgggacagat
gtcaggattagaaatggtcttcttaactgcaccgattgttatatccgatccagaactgct
ggacagccaactacattgtga
DBGET
integrated database retrieval system
